Escherichia coli TW14588 |
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Putative Escherichia coli TW14588 RM systems
Ref: Peroutka-Bigus,N. et al. unpublished
REBASE ref # 37890
| Sequence length: | GenBank #: | |
| Chromosome: | 5,544,683 bp | CP111095 |
| plasmid pTW14588-1: | 96,482 bp | CP111097 |
REBASE acronym: EcoW14588
Org_num: 73107
All begin ORM94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14535 | DUF262 domain-containing protein | |||
| 14540 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoW14588ORF14545P |
| 14545 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoW14588ORF14545P |
| 14550 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoW14588ORF14545P |
| 14555 | endoribonuclease SymE | |||
| 21480 | SprT family zinc-dependent metalloprotease | |||
| 21485 | R | EcoUM1886ORF17525P (99% identity) | YTCANNNNNNGTNG | EcoW14588ORF21505P |
| 21490 | macro domain-containing protein | |||
| 21495 | DUF4433 domain-containing protein | |||
| 21500 | S | S1.EcoUM1886ORF17525P (99% identity) | YTCANNNNNNGTNG | S1.EcoW14588ORF21505P |
| 21505 | M | M.EcoUM1886ORF17525P (100% identity) | YTCANNNNNNGTNG | M.EcoW14588ORF21505P |
| 21510 | 58 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 65 | phosphohydrolase | |||
| 70 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoW14588DcmP |
| 75 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.EcoW14588DcmP |
| 80 | drug/metabolite exporter YedA | |||
| 2305 | TrmB family transcriptional regulator | |||
| 2310 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoW14588ORF2310P | |
| 2325 | DUF1737 domain-containing protein | |||
| 3845 | DUF1367 family protein | |||
| 3850 | R | Ecos15739ORF2910P (100% identity) | EcoW14588ORF3860P | |
| 3855 | 329 aa hypothetical protein | |||
| 3860 | M | M.Ecos15739ORF2910P (100% identity) | M.EcoW14588ORF3860P | |
| 3865 | 35 aa hypothetical protein | |||
| 14770 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoW14588ORF14770P |
| 14775 | DEAD/DEAH box helicase | |||
| 14805 | N-acetylneuraminic acid mutarotase | |||
| 14810 | R | Ecos1613ORF26795P (100% identity) | EcoW14588ORF14810P | |
| 14815 | transposase | |||
| 19915 | cell division protein DamX | |||
| 19920 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoW14588DamP |
| 19925 | ribulose-phosphate 3-epimerase | |||
| 20430 | DUF2556 family protein | |||
| 20435 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoW14588ORF20435P |
| 20440 | DNA-binding transcriptional regulator Fis | |||
| plasmid pTW14588-1 | ||||
| 28025 | 73 aa hypothetical protein | |||
| 28030 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoW14588ORF28030P | |
| 28035 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14555 | endoribonuclease SymE | |||
| 14560 | R | EcosPA8GmrSDP (55% identity) | EcoW14588GmrDP | |
| 14565 | R | Ecos1613GmrSP (100% identity) | EcoW14588GmrSP | |
| 14570 | cytoplasmic protein | |||