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Putative Neisseria gonorrhoeae TH1713 RM systems
Ref: Golparian,D. unpublished
REBASE ref # 34767
Complete sequence: 2,228,256 bp
GenBank #: CP138342
REBASE acronym: Ngo3
Org_num: 73006
All begin SE147_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2065 | ADP-glyceromanno-heptose 6-epimerase | |||
2070 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNGTC | M.Ngo3ORF2070P |
2075 | DNA damage-inducible protein D | |||
2080 | S | S.NgoWMII (100% identity) | GCANNNNNNGTC | S.Ngo3ORF2070P |
2085 | R | Ngo8ORF2075P (100% identity) | GCANNNNNNGTC | Ngo3ORF2070P |
2090 | ATP-dependent Clp protease ATP-binding subunit | |||
3575 | replication-associated recombination protein A | |||
3580 | R | NgoWLIP (99% identity) | GAGNNNNNTAC | Ngo3ORF3605P |
3585 | hydroxyacid dehydrogenase | |||
3590 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo3ORF3605P |
3595 | 186 aa hypothetical protein | |||
3600 | 279 aa hypothetical protein | |||
3605 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo3ORF3605P |
3610 | ABC transporter | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
30 | leucine--tRNA ligase | |||
35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo3ORF45P |
40 | restriction endonuclease | |||
45 | M | M.Ngo8ORF45P (100% identity) | GATC | M.Ngo3ORF45P |
50 | 184 aa hypothetical protein | |||
1535 | phenylalanine--tRNA ligase subunit alpha | |||
1540 | V | V.NgoWSORF391P (100% identity) | V.Ngo3ORF1545P | |
??? | M | M.Ngo8ORF1545P (100% identity) | M.Ngo3ORF1545P | |
1555 | R | Npo18661ORFHP (100% identity) | CCGG | Ngo3ORF1545P |
1560 | phenylalanine--tRNA ligase subunit beta | |||
1865 | uroporphyrinogen decarboxylase | |||
1870 | H | H.NgoN160ORF1885P (100% identity) | H.Ngo3ORF1880P | |
1875 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo3ORF1880P |
1880 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo3ORF1880P |
1885 | DNA repair protein RadA | |||
3460 | 3-isopropylmalate dehydrogenase | |||
3465 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo3ORF3470P |
3470 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo3ORF3470P |
3475 | 3-isopropylmalate dehydratase small subunit | |||
4745 | anthranilate synthase component I | |||
4750 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo3ORF4750P |
4755 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo3ORF4750P |
4760 | 5-(carboxyamino)imidazole ribonucleotide | |||
6105 | replication initiation factor domain-containing | |||
6110 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo3ORF6125P | |
??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo3ORF6125P |
??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo3ORF6125P |
6135 | 48 aa hypothetical protein | |||
6320 | excinuclease ABC subunit UvrA | |||
6325 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo3ORF6330P |
6330 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo3ORF6330P |
6335 | 62 aa hypothetical protein | |||
9605 | FUSC family protein | |||
9610 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo3ORF9615P |
9615 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo3ORF9615P |
9620 | ribosome recycling factor | |||
10145 | 58 aa hypothetical protein | |||
10150 | R | NgoPID18ORF1848P (100% identity) | GGTGA | Ngo3ORF10155P |
10155 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.Ngo3ORF10155P |
10160 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo3ORF10155P |
10165 | Tex family protein | |||
10720 | GTPase ObgE | |||
10725 | M | M.NgoWFORF2310P (100% identity) | RGCGCY | M.Ngo3ORF10725P |
10730 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo3ORF10725P |
10735 | cysteine--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2810 | peptidylprolyl isomerase | |||
2815 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo3ORF2815P | |
2820 | R | Ngos1291ORF8455P (100% identity) | Ngo3ORF2815P | |
2825 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
3275 | alpha-hydroxy acid oxidase | |||
3280 | R | NgoCT602ORF3210P (100% identity) | GCAGA | Ngo3ORF3285P |
??? | M | M.NgoJH7ORFKP (100% identity) | GCAGA | M.Ngo3ORF3285P |
3295 | tRNA pseudouridine(55) synthase TruB |