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Putative Pseudomonas aeruginosa 2020CK-00195 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
Complete sequence: 7,207,768 bp
GenBank #: CP137912
REBASE acronym: Pae195
Org_num: 72835
All begin L4660_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
410 | site-specific integrase | |||
415 | M | M.PaePA7II (100% identity) | AGANNNNNNNNTCAA | M.Pae195ORF415P |
420 | S | S.PaePA7II (100% identity) | AGANNNNNNNNTCAA | S.Pae195ORF415P |
425 | R | PaePA7IIP (100% identity) | AGANNNNNNNNTCAA | Pae195ORF415P |
430 | C | C.PspBYT5ORF19420P (100% identity) | C.Pae195ORF415P | |
435 | 196 aa hypothetical protein | |||
1835 | sigma 54-interacting transcriptional regulator | |||
1840 | R | PaeMF1ORF1540P (99% identity) | Pae195ORF1850P | |
1845 | DNA recombination protein RmuC | |||
1850 | M | M.Pfl13852ORFAP (100% identity) | M.Pae195ORF1850P | |
1855 | S | S.Pfl13852ORFAP (100% identity) | S.Pae195ORF1850P | |
1860 | 48 aa hypothetical protein | |||
12355 | DNA-processing protein DprA | |||
12360 | M | M1.Pae973ORF12590P (100% identity) | M1.Pae195ORF12360P | |
12365 | M | M2.Pae973ORF12590P (100% identity) | M2.Pae195ORF12360P | |
12370 | S | S.Pae973ORF12590P (100% identity) | S.Pae195ORF12360P | |
12375 | R | Pae973ORF12590P (100% identity) | Pae195ORF12360P | |
12380 | AAA family ATPase | |||
23295 | IS3 family transposase | |||
23300 | R | PaeMF1ORF24740P (100% identity) | Pae195ORF23320P | |
23305 | 235 aa hypothetical protein | |||
23310 | AAA family ATPase | |||
23315 | S | S.PaeMF1ORF24740P (100% identity) | S.Pae195ORF23320P | |
23320 | M | M.PaeMF1ORF24740P (100% identity) | M.Pae195ORF23320P | |
23325 | helix-turn-helix domain-containing protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1640 | 94 aa hypothetical protein | |||
1645 | M | M.PaesS1ORF1335P (100% identity) | M.Pae195ORF1645P | |
1650 | V | V.PaesS1ORF1335P (100% identity) | V.Pae195ORF1645P | |
1655 | DISARM system phospholipase D-like protein DrmC | |||
1665 | DISARM system helicase DrmA | |||
1670 | RM | PaesS1ORF1360P (100% identity) | Pae195ORF1670P | |
1675 | DISARM system SNF2-like helicase DrmD | |||
11755 | 213 aa hypothetical protein | |||
11760 | M | M.PaeYTSY4ORF6725P (100% identity) | M.Pae195ORF11760P | |
11765 | 159 aa hypothetical protein | |||
22070 | nucleoid-associated protein YejK | |||
22075 | M | M.PspHORFAP (100% identity) | M.Pae195ORF22075P | |
22080 | Arc family DNA-binding protein | |||
25480 | nucleoid-associated protein YejK | |||
25485 | M | M.PspAK6UORFCP (100% identity) | M.Pae195ORF25485P | |
25490 | Arc family DNA-binding protein | |||
29400 | 83 aa hypothetical protein | |||
29405 | M | M.PaeTBCFORFBP (89% identity) | M.Pae195ORF29405P | |
29410 | phosphoadenosine phosphosulfate reductase family | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
12375 | HsdR family type I site-specific | |||
12380 | R | Pae973McrBP (100% identity) | Pae195McrBP | |
12385 | R | Pae973McrCP (100% identity) | Pae195McrCP | |
12390 | 166 aa hypothetical protein |