Riemerella anatipestifer RA-PNBC-21-0706-PC |
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Putative Riemerella anatipestifer RA-PNBC-21-0706-PC RM systems
Ref: Palomino-Tapia,V.A. and Nickel,L. unpublished
REBASE ref # 37791
Complete sequence: 2,571,986 bp
GenBank #: CP084354
REBASE acronym: RanC
Org_num: 72889
All begin LEQ05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12265 | 541 aa hypothetical protein | |||
| 12270 | M | M.RanSORF3415P (100% identity) | M.RanCORF12270P | |
| 12275 | S | S.RanSORF3415P (100% identity) | S.RanCORF12270P | |
| 12280 | four helix bundle protein | |||
| 12285 | R | RanSORF3415P (99% identity) | RanCORF12270P | |
| 12290 | IS982-like element ISRa1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 80 | 55 aa hypothetical protein | |||
| 85 | M | M.RanCORF2180P (100% identity) | M.RanCORF85P | |
| 90 | DUF1320 family protein | |||
| 1610 | master DNA invertase Mpi family serine-type | |||
| 1615 | RM | RanSORF360EP (73% identity) | RanCORF1615AP | |
| 1620 | RM | TspBF2MORF12350P (9% identity) | RanCORF1615BP | |
| 1625 | RM | RanSORF360DP (100% identity) | RanCORF1615CP | |
| 1630 | IS982-like element ISRa1 family transposase | |||
| 1635 | RM | RanSORF360CP (59% identity) | RanCORF1615DP | |
| 1640 | RM | RanSORF360CP (37% identity) | RanCORF1615EP | |
| 1645 | RM | RanSORF360BP (100% identity) | RanCORF1615FP | |
| 1650 | RM | RanSORF360AP (100% identity) | RanCORF1615GP | |
| 1655 | 195 aa hypothetical protein | |||
| 2175 | 55 aa hypothetical protein | |||
| 2180 | M | M.RanCORF85P (100% identity) | M.RanCORF2180P | |
| 2185 | DUF1320 family protein | |||
| 4630 | 55 aa hypothetical protein | |||
| 4635 | M | M.RanSORF10995BP (100% identity) | M.RanCORF4635AP | |
| 4640 | IS982-like element ISRa1 family transposase | |||
| 4645 | M | M.RanSORF10995AP (99% identity) | M.RanCORF4635BP | |
| 4650 | DUF1320 family protein | |||
| 11160 | 120 aa hypothetical protein | |||
| 11165 | M | M.RanSORF4475P (100% identity) | M.RanCORF11165P | |
| 11170 | 219 aa hypothetical protein | |||
| 11690 | 164 aa hypothetical protein | |||
| 11695 | M | M.RanSORF3965P (100% identity) | M.RanCORF11695P | |
| 11700 | type II restriction endonuclease | |||
| 11695 | DNA adenine methylase | |||
| 11700 | R | RanY11ORF9010P (99% identity) | GATC | RanCORF11705P |
| 11705 | M | M2.RanXG19ORF3010P (100% identity) | GATC | M.RanCORF11705P |
| 11710 | IS1 family transposase | |||