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Putative Pseudomonas aeruginosa CDC1270 RM systems
Ref: Velcani,F. et al. Ophthalmology 130 (11), 1118-1120 (2023)
REBASE ref # 37823
Complete sequence: 7,082,821 bp
GenBank #: CP137556
REBASE acronym: Pae270
Org_num: 72850
All begin
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
??? | M | M.Paes32ORF100P (97% identity) | ATGNNNNNNNTCYC | M.Pae270ORFHP |
??? | S | S.Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | S.Pae270ORFHP |
??? | R | Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | Pae270ORFHP |
??? | R | Pae48ORF31915P (100% identity) | GGYANNNNNNRTGT | Pae270ORFGP |
??? | M | M.Pae48ORF31915P (100% identity) | GGYANNNNNNRTGT | M.Pae270ORFGP |
??? | S | S.Pae48ORF31915P (100% identity) | GGYANNNNNNRTGT | S.Pae270ORFGP |
??? | M | M.PaesPA2ORF12950P (100% identity) | GAAGNNNNNTGA | M.Pae270ORFEP |
??? | S | S.PaesPA2ORF12950P (100% identity) | GAAGNNNNNTGA | S.Pae270ORFEP |
??? | R | PaesPA2ORF12950P (100% identity) | GAAGNNNNNTGA | Pae270ORFEP |
??? | R | Pae48ORF8510P (100% identity) | GTGANNNNNNTGG | Pae270ORFJP |
??? | S | S.Pae48ORF8470P (100% identity) | GTGANNNNNNTGG | S.Pae270ORFJP |
??? | M | M.Pae48ORF8470P (100% identity) | GTGANNNNNNTGG | M.Pae270ORFJP |
??? | R | Pae48ORF33250P (99% identity) | Pae270ORFAP | |
??? | S | S.Pae48ORF33250P (100% identity) | S.Pae270ORFAP | |
??? | M | M.Bbr632ORF915P (94% identity) | M.Pae270ORFAP | |
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
??? | M | M.Sma866ORF16510P (100% identity) | M.Pae270ORFFP | |
??? | M | M.PaeZM03ORFCP (100% identity) | M.Pae270ORFDP | |
??? | M | M.Paezw26ORF4891P (100% identity) | M.Pae270ORFCP | |
??? | RM | PstAGORF16520P (100% identity) | AAGAYC | Pae270ORFBP |
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
??? | R | Pae48McrCP (100% identity) | Pae270McrCP | |
??? | R | Pae48McrBP (100% identity) | Pae270McrBP |