Escherichia coli 2017.17.03CC |
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Putative Escherichia coli 2017.17.03CC RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,915,580 bp | AP027829 |
| plasmid p2017.17.03CC_1: | 225,168 bp | AP027830 |
| plasmid p2017.17.03CC_3: | 85,953 bp | AP027832 |
| plasmid p2017.17.03CC_5: | 80,254 bp | AP027834 |
REBASE acronym: Eco703CC
Org_num: 72601
All begin VEE61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14930 | 164 aa hypothetical protein | |||
| 14940 | R | Eco13167ORF1269P (100% identity) | Eco703CCORF14960P | |
| 14950 | S | S.EcoB27ORF10860P (100% identity) | S.Eco703CCORF14960P | |
| 14960 | M | M.Eco13167ORF1269P (100% identity) | M.Eco703CCORF14960P | |
| 14970 | 130 aa hypothetical protein | |||
| 32880 | 111 aa hypothetical protein | |||
| 32890 | R | EcoAH65ORF13950P (100% identity) | Eco703CCORF32890P | |
| 32900 | 320 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8500 | multidrug transporter | |||
| 8510 | V | V.SflFF59DcmP (100% identity) | CCWGG | V.Eco703CCDcmP |
| 8520 | M | M.SflN107DcmP (100% identity) | CCWGG | M.Eco703CCDcmP |
| 8530 | phosphohydrolase | |||
| 9800 | 81 aa hypothetical protein | |||
| 9810 | R | EcoYSP81ORFBP (100% identity) | RCSRC | Eco703CCORF9810P |
| 9820 | 252 aa hypothetical protein | |||
| 18410 | RM | Kpn180ORF22105P (91% identity) | GAAABCC | Eco703CCORF18410P |
| 18420 | ATP-dependent helicase | |||
| 21350 | DNA-binding protein Fis | |||
| 21360 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco703CCORF21360P |
| 21370 | acrEF/envCD operon repressor | |||
| 22530 | ribulose-phosphate 3-epimerase | |||
| 22540 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco703CCDamP |
| 22550 | cell division protein DamX | |||
| 29650 | 57 aa hypothetical protein | |||
| 29660 | M | M.SflN101ORF11410P (100% identity) | GATC | M.Eco703CCORF29660P |
| 29670 | LexA family transcriptional regulator | |||
| 29720 | 75 aa hypothetical protein | |||
| 29730 | M | M.Eco16175ORFHP (100% identity) | M.Eco703CCORF29730P | |
| 29740 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 33970 | 162 aa hypothetical protein | |||
| 33980 | M | M.Sbo4868ORF10650P (100% identity) | GATC | M.Eco703CCORF33980P |
| 33990 | LexA family transcriptional regulator | |||
| 46800 | 65 aa hypothetical protein | |||
| 46810 | M | M.SflFF12ORF4115P (100% identity) | M.Eco703CCORF46810P | |
| 46820 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| plasmid p2017.17.03CC_1 | ||||
| 48050 | 55 aa hypothetical protein | |||
| 48060 | M | M.Eco1CORF395P (99% identity) | M.Eco703CCORF48060P | |
| 48070 | nuclease | |||
| 48210 | chromosome segregation protein SMC | |||
| 48220 | RM | EcoS30ORF25190P (100% identity) | Eco703CCORF48220P | |
| 48230 | 1204 aa hypothetical protein | |||
| 49250 | DNA-binding protein | |||
| 49260 | M | M.Ype21801ORF197P (100% identity) | M.Eco703CCORF49260P | |
| 49270 | 273 aa hypothetical protein | |||
| plasmid p2017.17.03CC_3 | ||||
| 50790 | 308 aa hypothetical protein | |||
| 50800 | M | M.SflFF3ORF25360P (100% identity) | SAY | M.Eco703CCORF50800P |
| 50810 | 73 aa hypothetical protein | |||
| plasmid p2017.17.03CC_5 | ||||
| 52880 | plasmid stability protein StbA | |||
| 52890 | M | M.Sfl1602ORF27080P (100% identity) | M.Eco703CCORF52890P | |
| 52900 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9970 | 108 aa hypothetical protein | |||
| ??? | R | EcoPSS13ORFAP (100% identity) | Eco703CCORFAP | |
| 9980 | 86 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 43190 | 75 aa hypothetical protein | |||
| 43200 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco703CCORF43200P |
| 43210 | replication endonuclease from | |||