Escherichia coli 2017.06.05CC |
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Putative Escherichia coli 2017.06.05CC RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,875,672 bp | AP027790 |
| plasmid p2017.06.05CC_2: | 91,524 bp | AP027792 |
| plasmid p2017.06.05CC_3: | 81,096 bp | AP027793 |
REBASE acronym: Eco5CC
Org_num: 72595
All begin VEE55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 38940 | 139 aa hypothetical protein | |||
| 38950 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco5CCORF38960P |
| 38960 | M | M.SflTORF4636P (98% identity) | CCANNNNNNNNNTTGG | M.Eco5CCORF38960P |
| 38970 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Eco5CCORF38960P |
| 38980 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3290 | cell division protein DamX | |||
| 3300 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco5CCDamP |
| 3310 | ribulose-phosphate 3-epimerase | |||
| 4290 | acrEF/envCD operon transcriptional regulator | |||
| 4300 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco5CCORF4300P |
| 4310 | integrase | |||
| 18170 | phosphohydrolase | |||
| 18180 | M | M.EcosPA11DcmP (100% identity) | CCWGG | M.Eco5CCDcmP |
| 18190 | V | V.EcosPA11DcmP (100% identity) | V.Eco5CCDcmP | |
| 18200 | inner membrane transporter YedA | |||
| 39470 | 9-O-acetyl-N-acetylneuraminic acid | |||
| ??? | R | SflN101ORF11875P (100% identity) | Eco5CCORF39480P | |
| 39500 | 691 aa hypothetical protein | |||
| plasmid p2017.06.05CC_2 | ||||
| 47010 | 73 aa hypothetical protein | |||
| 47020 | M | M.SflN92ORF24820P (100% identity) | M.Eco5CCORF47020P | |
| 47030 | 145 aa hypothetical protein | |||
| plasmid p2017.06.05CC_3 | ||||
| 47530 | 73 aa hypothetical protein | |||
| 47540 | M | M.Sso866ORF27155P (100% identity) | M.Eco5CCORF47540P | |
| 47550 | 308 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 38980 | endoribonuclease SymE | |||
| ??? | R | SflN101GmrSP (100% identity) | Eco5CCGmrSP | |
| 39010 | 49 aa hypothetical protein | |||