Escherichia coli 2017-03-3CC |
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Putative Escherichia coli 2017-03-3CC RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,778,214 bp | AP027783 |
| plasmid p2017-03-3CC_1: | 294,708 bp | AP027784 |
| plasmid p2017-03-3CC_3: | 95,808 bp | AP027786 |
REBASE acronym: Eco33CC
Org_num: 72588
All begin VEE74_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p2017-03-3CC_3 | ||||
| 50310 | 73 aa hypothetical protein | |||
| 50320 | M | M.EcoEA13ORF24000P (99% identity) | M.Eco33CCORF50320P | |
| 50330 | S | S.EcoC6335ORF27850P (100% identity) | S.Eco33CCORF50320P | |
| 50340 | R | EfeC18ORF22895P (100% identity) | Eco33CCORF50320P | |
| 50350 | 168 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3260 | cell division protein DamX | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco33CCDamP |
| 3280 | ribulose-phosphate 3-epimerase | |||
| 4450 | acrEF/envCD operon repressor | |||
| 4460 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco33CCORF4460P |
| 4470 | DNA-binding protein Fis | |||
| 17160 | phosphohydrolase | |||
| 17170 | M | M.SflN116DcmP (100% identity) | CCWGG | M.Eco33CCDcmP |
| 17180 | V | V.SflN116DcmP (100% identity) | CCWGG | V.Eco33CCDcmP |
| 17190 | amino acid exporter for phenylalanine, | |||
| 24060 | 192 aa hypothetical protein | |||
| 24070 | M | M.KpnP585ORF3525P (98% identity) | M.Eco33CCORF24070P | |
| 24080 | 102 aa hypothetical protein | |||
| 25690 | 63 aa hypothetical protein | |||
| 25700 | M | M.Ecoppa6ORF4450P (100% identity) | M.Eco33CCORF25700P | |
| 25710 | 67 aa hypothetical protein | |||
| 30040 | replication endonuclease from | |||
| 30050 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco33CCORF30050P |
| 30060 | 75 aa hypothetical protein | |||
| 35590 | 288 aa hypothetical protein | |||
| 35600 | R | Sso8033ORF3755P (99% identity) | CCWGG | Eco33CCORF35610P |
| 35610 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.Eco33CCORF35610P |
| 35620 | 257 aa hypothetical protein | |||
| 35940 | Lysis protein S homolog from lambdoid prophage | |||
| 35950 | M | M.EcoEC14ORF17725P (100% identity) | M.Eco33CCORF35950P | |
| 35960 | 67 aa hypothetical protein | |||
| plasmid p2017-03-3CC_1 | ||||
| 46760 | 55 aa hypothetical protein | |||
| ??? | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Eco33CCORF46770P |
| 46790 | nuclease | |||
| 48010 | 108 aa hypothetical protein | |||
| 48020 | M | M.YpsF1ORFBP (100% identity) | M.Eco33CCORF48020P | |
| 48030 | 202 aa hypothetical protein | |||
| 48270 | DNA-binding protein | |||
| 48280 | M | M.YpsF1ORFDP (84% identity) | M.Eco33CCORF48280P | |
| 48290 | 85 aa hypothetical protein | |||
| plasmid p2017-03-3CC_3 | ||||
| 50520 | 63 aa hypothetical protein | |||
| 50530 | M | M.Eco25DECORF24160P (100% identity) | M.Eco33CCORF50530P | |
| 50540 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 39420 | restriction endonuclease | |||
| 39430 | R | EcoYJ6McrCP (100% identity) | Eco33CCMcrCP | |
| 39440 | R | EcoK006McrBP (100% identity) | Eco33CCMcrBP | |
| 39450 | 123 aa hypothetical protein | |||