Escherichia coli PSS-08-1 |
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Putative Escherichia coli PSS-08-1 RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,723,054 bp | AP027676 |
| plasmid pPSS-08-1_1: | 237,772 bp | AP027677 |
| plasmid pPSS-08-1_2: | 87,954 bp | AP027678 |
REBASE acronym: EcoS081
Org_num: 72660
All begin VEE18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10960 | N-acetyltransferase | |||
| 10970 | M | M.EcoALH8ORF18005P (99% identity) | M.EcoS081ORF10970P | |
| 10980 | S | S.Eco31E3C04ORF17630P (63% identity) | S.EcoS081ORF10970P | |
| 10990 | 395 aa hypothetical protein | |||
| 11000 | R | Eco31E3C04ORF17630P (99% identity) | EcoS081ORF10970P | |
| 11010 | 164 aa hypothetical protein | |||
| 39290 | 540 aa hypothetical protein | |||
| 39300 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoS081ORF39310P |
| 39310 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoS081ORF39310P |
| 39320 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoS081ORF39310P |
| 39330 | 104 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3580 | cell division protein DamX | |||
| 3590 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS081DamP |
| 3600 | ribulose-phosphate 3-epimerase | |||
| 4750 | acrEF/envCD operon repressor | |||
| 4760 | M | M.EcoC149ORFAP (100% identity) | ATGCAT | M.EcoS081ORF4760P |
| 4770 | DNA-binding protein Fis | |||
| 17370 | 231 aa hypothetical protein | |||
| 17380 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoS081DcmP |
| 17390 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoS081DcmP |
| 17400 | inner membrane transporter YedA | |||
| 28550 | replication endonuclease from | |||
| 28560 | M | M.EcoPEC0009ORF23875P (100% identity) | GATC | M.EcoS081ORF28560P |
| 28570 | 75 aa hypothetical protein | |||
| 37790 | 216 aa hypothetical protein | |||
| 37800 | R | EcoH58ORFFP (99% identity) | GAAC | EcoS081ORF37800P |
| 37810 | integrase | |||
| plasmid pPSS-08-1_1 | ||||
| 44710 | 55 aa hypothetical protein | |||
| 44720 | M | M.StyCORF187P (100% identity) | CCWGG | M.EcoS081ORF44720P |
| 44730 | nuclease | |||
| 45370 | chromosome segregation protein SMC | |||
| 45380 | RM | EcoS30ORF25190P (100% identity) | EcoS081ORF45380P | |
| 45390 | 1204 aa hypothetical protein | |||
| 46420 | DNA-binding protein | |||
| 46430 | M | M.Ype21801ORF197P (100% identity) | M.EcoS081ORF46430P | |
| 46440 | 273 aa hypothetical protein | |||
| plasmid pPSS-08-1_2 | ||||
| 47390 | 226 aa hypothetical protein | |||
| 47400 | M | M.Eco444ORFKP (90% identity) | M.EcoS081ORF47400P | |
| 47410 | 95 aa hypothetical protein | |||