Escherichia coli PSJ-42 |
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Putative Escherichia coli PSJ-42 RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,797,770 bp | AP027652 |
| plasmid pPSJ-42_2: | 116,456 bp | AP027654 |
REBASE acronym: EcoPSJ42
Org_num: 72657
All begin VEE39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 36220 | endoribonuclease SymE | |||
| 36230 | R | EcoYZ311ORF11340P (100% identity) | EcoPSJ42ORF36250P | |
| 36240 | S | S.EcoYZ311ORF11340P (100% identity) | S.EcoPSJ42ORF36250P | |
| 36250 | M | M.Esp9308ORFIP (100% identity) | M.EcoPSJ42ORF36250P | |
| 36260 | 388 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25590 | DNA-binding protein Fis | |||
| 25600 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.EcoPSJ42ORF25600P |
| 25610 | acrEF/envCD operon transcriptional regulator | |||
| 26750 | ribulose-phosphate 3-epimerase | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoPSJ42DamP |
| 26770 | cell division protein DamX | |||
| 39950 | integrase | |||
| 39960 | M | M.KpnFF77ORF20840P (100% identity) | GGTACC | M.EcoPSJ42ORF39960P |
| 39970 | 568 aa hypothetical protein | |||
| 40050 | 1213 aa hypothetical protein | |||
| 40060 | RM | EcoC0017ORF21855P (100% identity) | CANCATC | EcoPSJ42ORF40060P |
| 40070 | alkaline phosphatase | |||
| plasmid pPSJ-42_2 | ||||
| 46350 | 308 aa hypothetical protein | |||
| 46360 | M | M.StyR64ORFAP (100% identity) | M.EcoPSJ42ORF46360P | |
| 46370 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 36250 | DNA methyltransferase | |||
| 36260 | R | Ecou021MrrP (100% identity) | EcoPSJ42MrrP | |
| 36270 | membrane protein | |||