Escherichia coli 2018-05-5CC |
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Putative Escherichia coli 2018-05-5CC RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
Complete sequence: 4,708,743 bp
GenBank #: AP027886
REBASE acronym: Eco55CC
Org_num: 72609
All begin VEE47_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10440 | metal-dependent hydrolase | |||
| 10450 | R | EcoG49ORF8820P (99% identity) | Eco55CCORF10480P | |
| 10460 | 227 aa hypothetical protein | |||
| 10470 | S | S.Kpn15rORF5068P (99% identity) | S.Eco55CCORF10480P | |
| 10480 | M | M.EcoNT1F31ORF10715P (100% identity) | M.Eco55CCORF10480P | |
| 10490 | 79 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15460 | 127 aa hypothetical protein | |||
| 15470 | M | M.SflWW1ORF7070P (99% identity) | GATC | M.Eco55CCORF15470P |
| 15480 | protein ninB | |||
| 23780 | DNA-binding protein Fis | |||
| 23790 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco55CCORF23790P |
| 23800 | acrEF/envCD operon repressor | |||
| 24860 | ribulose-phosphate 3-epimerase | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco55CCDamP |
| 24880 | cell division protein DamX | |||
| 36700 | protein ninB | |||
| 36710 | M | M.SflLIN11ORF7170P (99% identity) | M.Eco55CCORF36710P | |
| 36720 | protein NinG | |||
| 37210 | 83 aa hypothetical protein | |||
| 37220 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco55CCORF37220P |
| 37230 | LexA family transcriptional regulator | |||
| 42090 | 64 aa hypothetical protein | |||
| 42100 | M | M.EcoSTEC413ORF8565P (100% identity) | M.Eco55CCORF42100P | |
| 42110 | phage holin, lambda family protein | |||
| 43240 | 75 aa hypothetical protein | |||
| 43250 | M | M.EcosBORF4330P (99% identity) | M.Eco55CCORF43250P | |
| 43260 | replication endonuclease from | |||