Microbacterium species Y20 |
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Putative Microbacterium species Y20 RM systems
Ref: Zhang,G. and Ding,Y. unpublished
REBASE ref # 37807
Complete sequence: 2,792,796 bp
GenBank #: CP137080
REBASE acronym: MspY20
Org_num: 72754
All begin RYJ27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2610 | tyrosine-type recombinase/integrase | |||
| 2615 | M | M.MspWY121ORFCP (90% identity) | M.MspY20ORF2615P | |
| ??? | S | S.Mau15219ORF2070P (27% identity) | S.MspY20ORF2615P | |
| 2625 | GIY-YIG nuclease family protein | |||
| 2630 | 65 aa hypothetical protein | |||
| 2635 | Ltp family lipoprotein | |||
| 2640 | DUF222 domain-containing protein | |||
| 2645 | R | MscA321ORF13275P (79% identity) | MspY20ORF2615P | |
| 2650 | YajQ family cyclic di-GMP-binding protein | |||
| 8325 | IS110 family transposase | |||
| 8330 | M | M.Mch101ORF3485P (95% identity) | M.MspY20ORF8330P | |
| 8335 | S | S.Cfl718ORF6640P (40% identity) | S.MspY20ORF8330P | |
| 8340 | R | Msp513ORF11670P (92% identity) | MspY20ORF8330P | |
| 8345 | SDR family oxidoreductase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1475 | biotin/lipoate A/B protein ligase family | |||
| 1480 | M | M.Mspcx55ORF13560P (67% identity) | M.MspY20ORF1480P | |
| 1485 | helix-turn-helix domain-containing protein | |||
| 2550 | DUF499 domain-containing protein | |||
| 2555 | M | M.MscA321ORF13435P (98% identity) | M.MspY20ORF2555P | |
| 2560 | R | MspWY121ORFAP (87% identity) | MspY20ORF2555P | |
| 2565 | helix-turn-helix domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5980 | DUF4391 domain-containing protein | |||
| 5985 | M | M.MspY1ORF420P (80% identity) | M.MspY20ORF5985P | |
| 5990 | 87 aa hypothetical protein | |||
| 5995 | R | MspY1ORF420P (84% identity) | MspY20ORF5985P | |
| 6000 | 488 aa hypothetical protein | |||