Raineyella species LH-20 |
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Putative Raineyella species LH-20 RM systems
Ref: Wang,J. unpublished
REBASE ref # 9334
Complete sequence: 3,632,335 bp
GenBank #: CP137003
REBASE acronym: RspLH20
Org_num: 72884
All begin R0146_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9255 | DUF2786 domain-containing protein | |||
| 9260 | R | Nar177ORF14635P (85% identity) | RspLH20ORF9285P | |
| 9265 | restriction endonuclease | |||
| 9270 | IS1634 family transposase | |||
| 9275 | winged helix-turn-helix domain-containing | |||
| 9280 | S | S.Asp30AORF12530P (46% identity) | S1.RspLH20ORF9285P | |
| 9285 | M | M.Nar177ORF14635P (88% identity) | M.RspLH20ORF9285P | |
| 9290 | S | S.Rsp12038ORF2910P (56% identity) | S2.RspLH20ORF9285P | |
| 9295 | thioredoxin domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 740 | helicase-related protein | |||
| 745 | RM | Rsp3103ORF1740P (77% identity) | RspLH20ORF745P | |
| 3235 | 306 aa hypothetical protein | |||
| 3240 | R | Gam43602ORF10030P (54% identity) | RspLH20ORF3260P | |
| 3245 | PD-(D/E)XK motif protein | |||
| 3250 | ATP-binding protein | |||
| 3255 | Swt1 family HEPN domain-containing protein | |||
| 3260 | M | M2.TspT2530ORF14545P (88% identity) | M1.RspLH20ORF3260P | |
| 3265 | V | V.TspT2530ORF14545P (68% identity) | V.RspLH20ORF3260P | |
| 3270 | M | M1.TspT2530ORF14545P (73% identity) | M2.RspLH20ORF3260P | |
| 3275 | AIPR family protein | |||
| 8875 | sulfurtransferase | |||
| 8885 | M | M.MspS1ORF48330P (54% identity) | M.RspLH20ORF8885P | |
| 8890 | 243 aa hypothetical protein | |||
| 9150 | neutral zinc metallopeptidase | |||
| 9155 | M | M.RspW154ORF12665P (91% identity) | M.RspLH20ORF9155P | |
| 9160 | phosphoribosyltransferase | |||
| 15510 | helix-turn-helix domain-containing protein | |||
| 15515 | M | M1.RspW154ORF5415P (100% identity) | M1.RspLH20ORF15515P | |
| 15520 | M | M2.Taq39ORF1910P (61% identity) | M2.RspLH20ORF15515P | |
| 15525 | ISL3 family transposase | |||
| 15530 | IS5 family transposase | |||
| 15535 | M | M2.Taq39ORF1910P (38% identity) | M.RspLH20ORF15535P | |
| 15540 | RM | Taq39ORF1910P (94% identity) | RspLH20ORF15535P | |
| 15545 | IS1380 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9260 | DEAD/DEAH box helicase family protein | |||
| 9265 | R | PspHY158MrrP (49% identity) | RspLH20MrrAP | |
| 9270 | IS1634 family transposase | |||
| 9275 | R | PspHY158MrrP (24% identity) | RspLH20MrrBP | |
| 9280 | restriction endonuclease subunit S | |||