Escherichia coli isolate F200 |
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Putative Escherichia coli isolate F200 RM systems
Ref: Leclercq,S. unpublished
REBASE ref # 37790
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,900,194 bp | OY754427 |
| plasmid pF200-2: | 93,406 bp | OY754429 |
REBASE acronym: EcoF200
Org_num: 72678
All begin FGAF200_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 18010 | IS5 family transposase | |||
| 18020 | M | M.Kpn99ORF25615P (100% identity) | M.EcoF200ORF18020P | |
| 18030 | S | S.EcoJS426ORF1170P (100% identity) | S.EcoF200ORF18020P | |
| 18040 | UPF0149 family protein YecA | |||
| 18050 | R | EcoZ063ORF9555P (100% identity) | EcoF200ORF18020P | |
| 18060 | SprT family zinc-dependent metalloprotease | |||
| 26910 | 81 aa hypothetical protein | |||
| 26920 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.EcoF200ORF26920P |
| 26930 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S1.EcoF200ORF26920P |
| 26940 | 218 aa hypothetical protein | |||
| 26950 | macro domain-containing protein | |||
| 26960 | R | PmeBin330ORFCP (100% identity) | GAGNNNNNGTTY | EcoF200ORF26920P |
| 26970 | SprT family zinc-dependent metalloprotease | |||
| 39720 | 184 aa hypothetical protein | |||
| 39730 | R | Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | EcoF200ORF39750P |
| 39740 | S | S.Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | S.EcoF200ORF39750P |
| 39750 | M | M.SenS0935ORF770P (99% identity) | ACYNNNNNNGTTC | M.EcoF200ORF39750P |
| 39760 | 165 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4460 | DUF2556 family protein | |||
| 4470 | M | M.Ecostr16ORFAP (100% identity) | ATGCAT | M.EcoF200ORF4470P |
| 4480 | DNA-binding transcriptional regulator Fis | |||
| 17520 | phosphohydrolase | |||
| 17530 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoF200DcmP |
| 17540 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoF200DcmP |
| 17550 | drug/metabolite exporter YedA | |||
| 29250 | 273 aa hypothetical protein | |||
| 29260 | M | M.Ecoi162ORF2844P (100% identity) | M.EcoF200ORF29260P | |
| 29270 | TraR/DksA family transcriptional regulator | |||
| 38420 | phage holin, lambda family | |||
| 38430 | M | M.SflLIN17ORF17405P (100% identity) | M.EcoF200ORF38430P | |
| 38440 | 64 aa hypothetical protein | |||
| 38490 | LexA family transcriptional regulator | |||
| 38500 | M | M.Sfl9783ORF197P (100% identity) | GATC | M.EcoF200ORF38500P |
| 38510 | PerC family transcriptional regulator | |||
| plasmid pF200-2 | ||||
| 47280 | tellurite resistance TerB family protein | |||
| 47290 | M | M.EcoEC0016ORF28360P (100% identity) | M.EcoF200ORF47290P | |
| 47300 | recombination-associated protein RdgC | |||