Escherichia coli isolate F374 |
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Putative Escherichia coli isolate F374 RM systems
Ref: Leclercq,S. unpublished
REBASE ref # 37790
Complete sequence: 5,345,520 bp
GenBank #: OY754371
REBASE acronym: EcoF374
Org_num: 72681
All begin FGAF374_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24300 | GTPase family protein | |||
| 24310 | M | M.Eco36C20ORF21465P (99% identity) | M.EcoF374ORF24310P | |
| 24320 | S | S.Eco91CCORF45220P (69% identity) | S.EcoF374ORF24310P | |
| 24330 | R | Eal150ORFIP (100% identity) | EcoF374ORF24310P | |
| 24340 | IS5 family transposase ISKpn26 | |||
| 24340 | IS5 family transposase ISKpn26 | |||
| ??? | M | M.EcoZ147ORF19115P (100% identity) | M.EcoF374ORF24350AP | |
| 24360 | M | M.SflFF17ORF9165P (27% identity) | M.EcoF374ORF24350BP | |
| 24370 | S | S.EcoZ147ORF19115P (100% identity) | S.EcoF374ORF24350P | |
| 24380 | IS3 family transposase | |||
| 38290 | toll/interleukin-1 receptor domain-containing | |||
| 38300 | M | M1.EcoR47ORF16440P (100% identity) | M1.EcoF374ORF38300P | |
| 38310 | M | M2.EcoR47ORF16440P (100% identity) | M2.EcoF374ORF38300P | |
| 38320 | S | S.EcoR47ORF16440P (100% identity) | S.EcoF374ORF38300P | |
| 38330 | R | EcoR47ORF16440P (100% identity) | EcoF374ORF38300P | |
| 38340 | 633 aa hypothetical protein | |||
| 38330 | HsdR family type I site-specific | |||
| 38340 | M | M.Eco77ORF24265P (98% identity) | M.EcoF374ORF38340P | |
| 38350 | 577 aa hypothetical protein | |||
| 38720 | 237 aa hypothetical protein | |||
| 38730 | R | Ecos135ORF4680P (100% identity) | EcoF374ORF38750P | |
| 38740 | S | S.Ecos135ORF4680P (100% identity) | S.EcoF374ORF38750P | |
| 38750 | M | M.Ecos135ORF4680P (100% identity) | M.EcoF374ORF38750P | |
| 38760 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11860 | drug/metabolite exporter YedA | |||
| 11870 | V | V.Ecostr9DcmP (74% identity) | CCWGG | V.EcoF374DcmP |
| 11880 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.EcoF374DcmP |
| 11890 | phosphohydrolase | |||
| 19200 | replication endonuclease | |||
| 19210 | M | M.EcoF1005ORF10740P (99% identity) | GATC | M.EcoF374ORF19210P |
| 19220 | TraR/DksA family transcriptional regulator | |||
| 26420 | DNA-binding transcriptional regulator Fis | |||
| 26430 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.EcoF374ORF26430P |
| 26440 | DUF2556 family protein | |||
| 27440 | ribulose-phosphate 3-epimerase | |||
| 27450 | M | M.Ecos69DamP (100% identity) | GATC | M.EcoF374DamP |
| 27460 | cell division protein DamX | |||
| 38240 | 37 aa hypothetical protein | |||
| 38250 | R | SspPIBORF19405P (100% identity) | EcoF374ORF38250P | |
| 38260 | ribonuclease HI | |||
| 39250 | PerC family transcriptional regulator | |||
| 39260 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoF374ORF39260P |
| 39270 | LexA family transcriptional regulator | |||
| 47370 | 71 aa hypothetical protein | |||
| 47380 | M | M.Sbo812ORFAP (100% identity) | GATC | M.EcoF374ORF47380P |
| 47390 | DUF1317 domain-containing protein | |||
| 48850 | TraR/DksA family transcriptional regulator | |||
| 48860 | M | M.SenG094ORF11761P (100% identity) | GATC | M.EcoF374ORF48860P |
| 48870 | replication endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 38270 | AAA domain-containing protein | |||
| 38280 | R | Efe9LTMrrP (98% identity) | EcoF374MrrP | |
| 38290 | toll/interleukin-1 receptor domain-containing | |||
| 38750 | class I SAM-dependent DNA methyltransferase | |||
| 38760 | R | EcoTHYM1GmrSDP (100% identity) | EcoF374GmrSDP | |
| 38770 | Fic family protein | |||