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Putative Pseudomonas syringae pv. actinidiae Yunnan3.2 RM systems
Ref: Yang,F. and Chen,H. unpublished
REBASE ref # 37831
Complete sequence: 6,564,315 bp
GenBank #: CP135283
REBASE acronym: Psy2
Org_num: 72882
All begin RRP02_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
20 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
25 | M | M.PsyQSY6ORFBP (100% identity) | AGCANNNNNGTC | M.Psy2ORF25P |
30 | S | S.PsyQSY6ORFBP (100% identity) | AGCANNNNNGTC | S.Psy2ORF25P |
35 | R | PsyQSY6ORFBP (99% identity) | AGCANNNNNGTC | Psy2ORF25P |
40 | 428 aa hypothetical protein | |||
120 | DEAD/DEAH box helicase family protein | |||
125 | M | M.PsyQSY6ORFGAP (100% identity) | GAYCNNNNNCTGC | M.Psy2ORF140AP |
130 | IS66-like element ISPsy34 family transposase | |||
135 | IS66 family insertion sequence element accessory | |||
140 | M | M.PsyYXH1ORFAP (68% identity) | GAYCNNNNNCTGC | M.Psy2ORF140BP |
145 | S | S1.PsyYXH1ORFAP (100% identity) | GAYCNNNNNCTGC | S.Psy2ORF140P |
150 | R | PsyYXH1ORFAP (99% identity) | GAYCNNNNNCTGC | Psy2ORF140P |
155 | SprT family zinc-dependent metalloprotease | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
910 | YifB family Mg chelatase-like AAA ATPase | |||
915 | M | M.PsyAH01ORF725P (100% identity) | CTCGAG | M.Psy2ORF915P |
920 | R | PsyYXH1ORFFP (100% identity) | CTCGAG | Psy2ORF915P |
925 | magnesium chelatase | |||
5330 | IS3 family transposase | |||
??? | RM | PsyQSY6ORFEP (100% identity) | Psy2ORF5335P | |
5345 | ATP-dependent helicase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
8660 | membrane-associated oxidoreductase | |||
8665 | M | M.PsyYXH1ORFCP (100% identity) | M.Psy2ORF8665P | |
8670 | 112 aa hypothetical protein | |||
8675 | 256 aa hypothetical protein | |||
8680 | R | PsyYXH1ORFCP (100% identity) | Psy2ORF8665P | |
8685 | 175 aa hypothetical protein |