Methanoplanus species FWC-SCC4 |
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Putative Methanoplanus species FWC-SCC4 RM systems
Ref: Chen,S.-C. et al. unpublished
REBASE ref # 37682
Complete sequence: 2,312,530 bp
GenBank #: CP043875
REBASE acronym: MspC4
Org_num: 72270
All begin F1737_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1270 | valine--tRNA ligase | |||
| 1275 | R | Man21220ORF1805P (85% identity) | MspC4ORF1295P | |
| 1280 | DUF262 domain-containing protein | |||
| 1285 | S | S1.Csp29ORFIP (29% identity) | S2.MspC4ORF1295P | |
| 1290 | S | S1.Man21220ORF1805P (82% identity) | S1.MspC4ORF1295P | |
| 1295 | M | M.Man21220ORF1805P (90% identity) | M.MspC4ORF1295P | |
| 1300 | cupin domain-containing protein | |||
| 4545 | DUF91 domain-containing protein | |||
| 4550 | M | M.Pve142ORF2030P (43% identity) | M1.MspC4ORF4550P | |
| 4555 | M | M2.Met15103ORFHP (68% identity) | M2.MspC4ORF4550P | |
| 4560 | S | S.CbaCB1ORF12570P (25% identity) | S.MspC4ORF4550P | |
| 4565 | 581 aa hypothetical protein | |||
| 4570 | 271 aa hypothetical protein | |||
| 4575 | 93 aa hypothetical protein | |||
| 4580 | R | Met15103ORFHP (75% identity) | MspC4ORF4550P | |
| 4585 | IS5 family transposase | |||
| 5045 | 5-formyltetrahydrofolate cyclo-ligase | |||
| 5055 | M | M.MspS4BFORF3735P (95% identity) | M.MspC4ORF5055P | |
| 5060 | S | S.Ano113360ORF14845P (39% identity) | S.MspC4ORF5055P | |
| 5065 | R | MspS4BFORF3735P (95% identity) | MspC4ORF5055P | |
| 5070 | 393 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2915 | ribulose 1,5-bisphosphate carboxylase | |||
| 2920 | M | M.Mor3596ORF315P (54% identity) | M.MspC4ORF2920P | |
| 2925 | diaminopimelate epimerase | |||
| 4305 | tyrosine-type recombinase/integrase | |||
| 4310 | M | M.Men3599ORF11580P (37% identity) | M.MspC4ORF4310P | |
| 4315 | 245 aa hypothetical protein | |||
| 7665 | 381 aa hypothetical protein | |||
| 7670 | M | M.Mor3596ORF11185P (60% identity) | M.MspC4ORF7670P | |
| 7675 | molecular chaperone DnaJ | |||
| 9555 | 284 aa hypothetical protein | |||
| 9560 | M | M.Men3599ORF6670P (61% identity) | M.MspC4ORF9560P | |
| 9565 | TrpB-like pyridoxal phosphate-dependent enzyme | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1275 | type I restriction endonuclease subunit R | |||
| 1280 | R | GthK1041GmrSDP (47% identity) | MspC4GmrSDP | |
| 1285 | 414 aa hypothetical protein | |||
| 5990 | DEAD/DEAH box helicase | |||
| 5995 | R | Bho8719MrrP (40% identity) | MspC4MrrP | |
| 6000 | 181 aa hypothetical protein | |||
| 8855 | tyrosine-type recombinase/integrase | |||
| 8860 | R | Man21220ORF4360P (56% identity) | MspC4ORF8860P | |
| 8865 | response regulator | |||