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Putative Nodosilinea species E11 RM systems
Ref: Xin,R. unpublished
REBASE ref # 37691
Sequence length: | GenBank #: | |
Chromosome: | 5,459,063 bp | CP136520 |
plasmid pA: | 497,759 bp | CP136514 |
plasmid pC: | 43,338 bp | CP136516 |
plasmid pD: | 24,317 bp | CP136517 |
REBASE acronym: NspE11
Org_num: 72285
All begin RRF56_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
13995 | 199 aa hypothetical protein | |||
14000 | R | Nsp2111ORF28420P (63% identity) | NspE11ORF14015P | |
14005 | type II toxin-antitoxin system Phd/YefM family | |||
14010 | type II toxin-antitoxin system VapC family | |||
14015 | M | M.Nsp2111ORF28420P (71% identity) | M.NspE11ORF14015P | |
14020 | S | S.NcyWK1ORF3670P (37% identity) | S.NspE11ORF14015P | |
14025 | AAA family ATPase | |||
plasmid pC | ||||
2235 | MobF family relaxase | |||
2240 | R | Psp7ORF15390P (56% identity) | NspE11ORF2265P | |
2245 | 114 aa hypothetical protein | |||
2250 | ATP-binding protein | |||
2255 | 344 aa hypothetical protein | |||
2260 | S | S.Tsp3ORF3474P (42% identity) | S.NspE11ORF2265P | |
2265 | M | M.Lsp3755ORF65520P (86% identity) | M.NspE11ORF2265P | |
2270 | tyrosine-type recombinase/integrase | |||
plasmid pD | ||||
2530 | chemotaxis protein CheB | |||
2535 | S | M.Aci21ORF61050P (25% identity) | S.NspE11ORF2535P | |
2415 | AAA family ATPase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3710 | DEAD/DEAH box helicase | |||
3715 | RM | CwaWHORF6410P (55% identity) | NspE11ORF3715P | |
4075 | adenosylcobinamide-phosphate synthase CbiB | |||
4080 | M | M.Lsp6406II (62% identity) | M.NspE11ORF4080P | |
4085 | R | PaesPA2ORF33320P (79% identity) | NspE11ORF4080P | |
4090 | translation initiation factor IF-3 | |||
5970 | helix-turn-helix transcriptional regulator | |||
5975 | R | NspE11ORF17055P (40% identity) | NspE11ORF5975P | |
5980 | 188 aa hypothetical protein | |||
12465 | 93 aa hypothetical protein | |||
12470 | M | M1.HensORFGP (20% identity) | M.NspE11ORF12470P | |
12475 | type II toxin-antitoxin system VapC family | |||
17050 | 200 aa hypothetical protein | |||
17055 | R | Pmu1806ORFPP (50% identity) | NspE11ORF17055P | |
17060 | SDR family oxidoreductase | |||
18470 | 179 aa hypothetical protein | |||
18475 | M | M.Pte30ORF12795P (83% identity) | M.NspE11ORF18475P | |
18480 | EcsC family protein | |||
22305 | NUDIX domain-containing protein | |||
22310 | M | M.Pte30ORF16040P (79% identity) | M.NspE11ORF22310P | |
22315 | NAD+ synthase | |||
plasmid pA | ||||
1790 | DUF488 domain-containing protein | |||
1795 | RM | Pte30ORF17815P (82% identity) | NspE11ORF1795P | |
1800 | 579 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
18025 | GNAT family N-acetyltransferase | |||
18030 | R | NspE11MrrP (76% identity) | NspE11Mrr2P | |
18035 | 99 aa hypothetical protein | |||
24080 | DUF3146 family protein | |||
24085 | R | NspE11Mrr2P (76% identity) | NspE11MrrP | |
24090 | helix-turn-helix transcriptional regulator |