Paenibacillus larvae PL006 |
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Putative Paenibacillus larvae PL006 RM systems
Ref: Obshta,O. et al. J Vet Diagn Invest, 10406387231200178 (2023) In press
REBASE ref # 37695
Complete sequence: 4,452,494 bp
GenBank #: CP121102
REBASE acronym: PlaPL006
Org_num: 72291
All begin P8T86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20420 | holin-like toxin | |||
| 20425 | M | M.PlaMEX14ORFDP (100% identity) | M.PlaPL006ORF20425P | |
| 20430 | S | S.PlaMEX14ORFDP (98% identity) | S.PlaPL006ORF20425P | |
| 20435 | R | PlaMEX14ORFDP (99% identity) | PlaPL006ORF20425P | |
| 20440 | DUF2399 domain-containing protein | |||
| 22265 | 79 aa hypothetical protein | |||
| 22270 | R | PlaMEX14ORFCP (70% identity) | PlaPL006ORF22270P | |
| 22275 | S | S.PlaMEX14ORFCP (100% identity) | S.PlaPL006ORF22270P | |
| 22280 | 49 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1750 | 173 aa hypothetical protein | |||
| 1755 | M | M.PlacVORF3649P (100% identity) | M.PlaPL006ORF1755P | |
| 1760 | 102 aa hypothetical protein | |||
| 3390 | 127 aa hypothetical protein | |||
| 3395 | M | M.PlaE1ORF1981P (100% identity) | CTCGAG | M.PlaPL006ORF3395P |
| 3400 | DNA (cytosine-5-)-methyltransferase | |||
| 3395 | N-6 DNA methylase | |||
| 3400 | M | M.PlaE1ORF1982P (100% identity) | GGCC | M.PlaPL006ORF3400P |
| 3405 | DUF134 domain-containing protein | |||
| 5675 | MazG-like family protein | |||
| 5680 | M | M.PlacVORF2731P (100% identity) | M.PlaPL006ORF5680P | |
| 5685 | Tn3 family transposase | |||
| 5690 | site-specific integrase | |||
| 5695 | tyrosine-type recombinase/integrase | |||
| 5700 | 55 aa hypothetical protein | |||
| 5705 | R | PlaMEX14ORFEP (100% identity) | CTGCAG | PlaPL006ORF5680P |
| 5710 | 308 aa hypothetical protein | |||
| 7715 | 60 aa hypothetical protein | |||
| 7720 | M | M.PlaMEX14ORFBP (100% identity) | M.PlaPL006ORF7720P | |
| 7725 | 121 aa hypothetical protein | |||
| 8705 | 169 aa hypothetical protein | |||
| 8710 | M | M.PlaPL006ORF13200P (100% identity) | M.PlaPL006ORF8710P | |
| 8715 | type II toxin-antitoxin system HicA family | |||
| 13195 | 169 aa hypothetical protein | |||
| 13200 | M | M.PlaPL006ORF8710P (100% identity) | M.PlaPL006ORF13200P | |
| 13205 | type II toxin-antitoxin system HicA family | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20330 | 23S rRNA (uracil(1939)-C(5))-methyltransferase | |||
| 20335 | R | PlacVORF4292P (100% identity) | PlaPL006ORF20335P | |
| 20340 | helix-turn-helix domain-containing protein | |||