|
Putative Pseudomonas species P105 RM systems
Ref: Stucky,T. et al. Microorganisms 11 (8), 2011 (2023)
REBASE ref # 37711
Sequence length: | GenBank #: | |
Chromosome: | 6,286,012 bp | CP126693 |
plasmid unnamed: | 132,071 bp | CP126694 |
REBASE acronym: PspP105
Org_num: 72332
All begin QOM08_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
24715 | helix-turn-helix transcriptional regulator | |||
24720 | M | M.PbrS1ORF25180P (93% identity) | M.PspP105ORF24720P | |
24725 | S | S1.PspP105ORF24720P (100% identity) | S.PspP105ORF24720P | |
24730 | ATP-binding protein | |||
24735 | R | PbrS1ORF25180P (98% identity) | PspP105ORF24720P | |
24740 | SprT family zinc-dependent metalloprotease | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
9360 | site-specific integrase | |||
9365 | R | R1.EluT977ORF13515P (58% identity) | PspP105ORF9370P | |
9370 | M | M.Prh2019ORF8600P (84% identity) | M.PspP105ORF9370P | |
9375 | pyocin activator PrtN family protein | |||
12335 | AAA family ATPase | |||
12340 | M | M.Bhi2G1ORF21055P (65% identity) | M.PspP105ORF12340P | |
12345 | MobH family relaxase | |||
16770 | DNA topoisomerase III | |||
16775 | M | M.PflN2E2ORF9925P (67% identity) | M.PspP105ORF16775P | |
16780 | 135 aa hypothetical protein | |||
plasmid unnamed | ||||
28710 | 106 aa hypothetical protein | |||
28715 | M | M.Pam351ORF5841P (97% identity) | M.PspP105ORF28715P | |
28720 | 204 aa hypothetical protein |