Trichodesmium erythraeum IMS101 |
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Putative Trichodesmium erythraeum IMS101 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 9669
Complete sequence: 7,750,108 bp
GenBank #: CP000393 (NC_008312)
REBASE acronym: Ter
Org_num: 3490
All begin Tery_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2417 | adenylate/guanylate cyclase | |||
| 2418 | M | M.Asp33047ORFHP (72% identity) | M.TerORF2418P | |
| 2419 | 110 aa conserved hypothetical protein | |||
| 2420 | 128 aa hypothetical protein | |||
| 2421 | S | S.Pru82ORF3352P (47% identity) | S.TerORF2418P | |
| 2422 | R | Cpa267ORF74750P (64% identity) | TerORF2418P | |
| 2423 | 127 aa hypothetical protein | |||
| 4470 | extracellular solute-binding protein, family 3 | |||
| 4471 | R | Asp1605IP (58% identity) | TerORF4473P | |
| 4472 | S | S.Kpn9644I (38% identity) | S.TerORF4473P | |
| 4473 | M | M.Nsp9414ORF12720P (54% identity) | M.TerORF4473P | |
| 4474 | N-acetylglucosamine 6-phosphate deacetylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 530 | 361 aa conserved hypothetical protein, conserved | |||
| 531 | M | M.Asp7108ORFQP (58% identity) | CGATCG | M.TerORF531P |
| 532 | 286 aa hypothetical protein | |||
| 949 | glutamyl-tRNA reductase | |||
| 950 | M | M.Asp90ORF10012P (58% identity) | M.TerORF950P | |
| ??? | R | Asp90ORF10012P (27% identity) | TerORF950P | |
| 952 | 94 aa hypothetical protein | |||
| 1525 | 233 aa conserved hypothetical protein | |||
| 1526 | M | modification methylase | M.TerORF1526P | |
| 1527 | 76 aa hypothetical protein | |||
| 3116 | 143 aa hypothetical protein | |||
| 3117 | M | M.TerORF4236P (94% identity) | M.TerORF3117P | |
| 3118 | helicase-like | |||
| 3904 | pseudogene | |||
| ??? | M | M.Oni7112ORF3108P (58% identity) | GATC | M.TerORF3905P |
| 3906 | R | Oni7112ORF3108P (62% identity) | GATC | TerORF3905P |
| 3907 | protein of unknown function DUF751 | |||
| 4235 | 66 aa conserved hypothetical protein | |||
| 4236 | M | M.TerORF3117P (94% identity) | M.TerORF4236P | |
| 4237 | helicase-like | |||
| 4274 | protein of unknown function UPF0175 | |||
| 4275 | M | M.Ael3563ORF12450P (67% identity) | M.TerORF4275P | |
| 4276 | helicase-like | |||
| 4524 | 261 aa hypothetical protein | |||
| 4525 | M | M.Csp7507ORF613P (73% identity) | CTGCAG | M.TerORF4525P |
| 4526 | R | CwaWHORF6562P (63% identity) | CTGCAG | TerORF4525P |
| 4527 | pseudogene | |||
| 4596 | 84 aa hypothetical protein | |||
| 4597 | M | type II DNA modification methyltransferase | ATCGAT | M.TerORF4597P |
| 4598 | Type I restriction-modification system | |||
| 4597 | type II DNA modification methyltransferase | |||
| 4598 | RM | FpsS6R6ORF5230P (4% identity) | TerORF4598P | |
| 4599 | aminopeptidase P. Metallo peptidase. MEROPS | |||
| 4650 | ribulose-5-phosphate 4-epimerase and related | |||
| ??? | R | type II restriction endonuclease NspV | TerORF4652P | |
| 4652 | M | M.PagC7805ORF1117P (64% identity) | M.TerORF4652P | |
| 4653 | surface antigen (D15) | |||
| 4677 | 233 aa conserved hypothetical protein | |||
| 4678 | M | M.Mpr81ORF6065P (72% identity) | GTCGAC | M.TerORF4678P |
| 4679 | pseudogene | |||
| 4809 | calcium-translocating P-type ATPase, PMCA-type | |||
| 4810 | M | M.Tbo703ORF18680P (75% identity) | GCSGC | M.TerORF4810P |
| ??? | R | 135 aa hypothetical protein Tery_4811 | GCSGC | TerORF4810P |
| 4812 | pseudogene | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3581 | pseudogene | |||
| 3582 | R | Nca2107McrCP (44% identity) | TerMcrCP | |
| 3583 | R | Pru7821McrBP (56% identity) | TerMcrBP | |
| 3584 | 146 aa conserved hypothetical protein | |||