Escherichia coli TUM2830 |
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Putative Escherichia coli TUM2830 RM systems
Ref: Komori,K. et al. unpublished
REBASE ref # 37603
| Sequence length: | GenBank #: | |
| Chromosome: | 4,947,167 bp | CP135685 |
| plasmid pMTY2830_IncF: | 123,440 bp | CP135686 |
| plasmid pMTY2830_IncFII: | 70,341 bp | CP135687 |
REBASE acronym: Eco830
Org_num: 72059
All begin RS164_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18510 | type IV toxin-antitoxin system AbiEi family | |||
| 18515 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco830ORF18520P |
| 18520 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco830ORF18520P |
| 18525 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco830ORF18520P |
| 18530 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1705 | cell division protein DamX | |||
| 1710 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco830DamP |
| 1715 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco830ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 10050 | phosphohydrolase | |||
| 10055 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco830DcmP |
| 10060 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco830DcmP |
| 10065 | drug/metabolite exporter YedA | |||
| 20470 | McrC family protein | |||
| 20475 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco830ORF20480P |
| 20480 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco830ORF20480P |
| 20485 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco830ORF20480P |
| 20490 | helix-turn-helix domain-containing protein | |||
| 20775 | response regulator receiver domain | |||
| 20780 | R | Ecos19ORF20635P (100% identity) | Eco830ORF20780P | |
| 20785 | 97 aa hypothetical protein | |||
| plasmid pMTY2830_IncF | ||||
| 24645 | 73 aa hypothetical protein | |||
| 24650 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco830ORF24650P |
| 24655 | 103 aa hypothetical protein | |||
| plasmid pMTY2830_IncFII | ||||
| 24830 | 97 aa hypothetical protein | |||
| 24835 | M | M.Ssop356ORFAP (100% identity) | M.Eco830ORF24835P | |
| 24840 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20460 | glycosyltransferase family 2 protein | |||
| 20465 | R | EcosS3McrBP (100% identity) | Eco830McrBP | |
| 20470 | R | EcosS9McrCP (100% identity) | Eco830McrCP | |
| 20475 | Alw26I/Eco31I/Esp3I family type II restriction | |||