Ralstonia eutropha |
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Putative Ralstonia eutropha RM systems
Ref: Pohlmann,A. et al. Nat. Biotechnol. 24 (10), 1257-1262 (2006)
REBASE ref # 9616
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,052,032 bp | AM260479 (NC_008313) |
| megaplasmid pHG1: | 452,156 bp | AY305378 (NC_005241) |
REBASE acronym: ReuH
Org_num: 4479
All begin H16_A, PHG
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3 | DNA gyrase subunit B | |||
| 4 | M | M.CneH16I (100% identity) | GAYNNNNNCTTGY | M.ReuHORF4P |
| 5 | S | S.CneH16I (100% identity) | GAYNNNNNCTTGY | S.ReuHORF4P |
| 6 | R | CneH16IP (100% identity) | GAYNNNNNCTTGY | ReuHORF4P |
| 7 | predicted metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2612 | tryptophan synthase alpha chain | |||
| 2613 | M | M.RspGA33ORF29085P (100% identity) | GTWWAC | M.ReuHORF2613P |
| 2614 | tryptophan synthase beta chain | |||
| megaplasmid pHG1 | ||||
| 324 | 373 aa conserved hypothetical protein | |||
| 325 | M | M.CneH16ORF33850P (100% identity) | M.ReuHORF325P | |
| 326 | 196 aa conserved hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 7 | predicted metal-dependent hydrolase | |||
| 8 | R | CneH16McrBP (100% identity) | ReuHMcrBP | |
| 9 | R | Cne26McrCP (100% identity) | ReuHMcrCP | |
| 10 | phage-related protein | |||
| 13 | 280 aa conserved hypothetical protein | |||
| 14 | R | BspSB47McrBP (23% identity) | ReuHMcrB2P | |
| 15 | 109 aa conserved hypothetical protein | |||