Pseudomonas aeruginosa Paer3554 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas aeruginosa Paer3554 RM systems
Ref: Stoikov,I. et al. unpublished
REBASE ref # 37589
Complete sequence: 6,899,894 bp
GenBank #: CP135096
REBASE acronym: Pae3554
Org_num: 71990
All begin RPM46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3880 | MarR family transcriptional regulator | |||
| 3885 | M | M.SacT018ORFDP (100% identity) | CAGNNNNNNCTCG | M.Pae3554ORF3885P |
| 3890 | S | S.Pae501ORF12690P (100% identity) | CAGNNNNNNCTCG | S.Pae3554ORF3885P |
| 3895 | anticodon nuclease | |||
| 3900 | R | SacT018ORFDP (99% identity) | CAGNNNNNNCTCG | Pae3554ORF3885P |
| 3905 | virulence RhuM family protein | |||
| 5415 | peptidase M15 | |||
| 5420 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | Pae3554ORF5430P |
| 5425 | HNH endonuclease signature motif containing | |||
| 5430 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.Pae3554ORF5430P |
| 5435 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.Pae3554ORF5430P |
| 5440 | endonuclease NucS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9760 | Arc family DNA-binding protein | |||
| 9765 | M | M.PspAK6UORFCP (100% identity) | M.Pae3554ORF9765P | |
| 9770 | nucleoid-associated protein YejK | |||
| 11460 | 58 aa hypothetical protein | |||
| 11465 | M | M.PaeXP23ORF23840P (100% identity) | M.Pae3554ORF11465P | |
| 11470 | 58 aa hypothetical protein | |||
| 17540 | 185 aa hypothetical protein | |||
| ??? | M | M.SmaCSM2ORF7750P (100% identity) | M.Pae3554ORF17545P | |
| 17550 | DNA topoisomerase III | |||
| 19555 | 185 aa hypothetical protein | |||
| 19560 | M | M.SfrTF18ORF14295P (100% identity) | M.Pae3554ORF19560P | |
| 19565 | DUF2293 domain-containing protein | |||
| 19655 | TnsA endonuclease N-terminal domain-containing | |||
| ??? | M | M.Sma866ORF16510P (100% identity) | M.Pae3554ORF19660P | |
| 19665 | DNA topoisomerase III | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18160 | DUF4391 domain-containing protein | |||
| 18165 | M | M.PaeXP23ORF11340P (100% identity) | AGGAGY | M.Pae3554ORF18165P |
| 18170 | R | PaeXP23ORF11340P (100% identity) | AGGAGY | Pae3554ORF18165P |
| 18175 | 367 aa hypothetical protein | |||