Thalassospiraceae bacterium LMO-JJ14 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Thalassospiraceae bacterium LMO-JJ14 RM systems
Ref: Ahmad,T. et al. unpublished
REBASE ref # 36327
Complete sequence: 3,893,486 bp
GenBank #: CP134604
REBASE acronym: TbaJJ14
Org_num: 72015
All begin L2D14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 520 | restriction system-associated AAA family ATPase | |||
| 525 | S | S.Dde132ORFDP (34% identity) | S.TbaJJ14ORF530P | |
| 530 | M | M.AspAMDI (80% identity) | M.TbaJJ14ORF530P | |
| 535 | R | GhaSAP1ORF8915P (76% identity) | TbaJJ14ORF530P | |
| 540 | restriction endonuclease | |||
| 2900 | site-specific integrase | |||
| 2905 | R | Rma10ORF5050P (83% identity) | TbaJJ14ORF2920P | |
| 2910 | S | S.AspTH136ORF5855P (23% identity) | S.TbaJJ14ORF2920P | |
| 2915 | 241 aa hypothetical protein | |||
| 2920 | M | M.Rma10ORF5050P (87% identity) | M.TbaJJ14ORF2920P | |
| 2925 | DUF5655 domain-containing protein | |||
| 6485 | ParB/RepB/Spo0J family partition protein | |||
| 6490 | R | Mpa9ORF13320P (71% identity) | TbaJJ14ORF6500P | |
| 6495 | S | S.Vba26134ORF6065P (36% identity) | S.TbaJJ14ORF6500P | |
| 6500 | M | M.Mpa9ORF13320P (79% identity) | M.TbaJJ14ORF6500P | |
| 6505 | recombinase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4235 | 206 aa hypothetical protein | |||
| 4240 | M | M.Rba5959ORF8110P (64% identity) | M.TbaJJ14ORF4240P | |
| 4245 | glutaredoxin domain-containing protein | |||
| 12450 | 411 aa hypothetical protein | |||
| 12455 | M | M.SpaS2ORF11070P (51% identity) | M.TbaJJ14ORF12455P | |
| 12460 | EAL domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 535 | DEAD/DEAH box helicase family protein | |||
| 540 | R | RvaDMrrP (59% identity) | TbaJJ14MrrP | |
| 545 | bifunctional DNA primase/polymerase | |||