Treponema saccharophilum JCM 32279 |
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Putative Treponema saccharophilum JCM 32279 RM systems
Ref: Anda,M. and Iwasaki,W. unpublished
REBASE ref # 37571
| Sequence length: | GenBank #: | |
| Chromosome: | 2,645,182 bp | AP025288 |
| plasmid pTS1: | 423,813 bp | AP025289 |
REBASE acronym: Tsa32279
Org_num: 72017
All begin TRSA_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pTS1 | ||||
| 23800 | 128 aa hypothetical protein | |||
| 23810 | R | PmeBin668ORFAP (64% identity) | Tsa32279ORF23830P | |
| 23820 | ATP-binding protein | |||
| 23830 | M | M.Bfr310ORF8575P (76% identity) | M.Tsa32279ORF23830P | |
| 23840 | 298 aa hypothetical protein | |||
| 23850 | S | S.HpyV006ORF2210P (20% identity) | S.Tsa32279ORF23830P | |
| 23860 | 291 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 600 | altronate hydrolase | |||
| 610 | M | M.TspJC4ORF1180P (59% identity) | M.Tsa32279ORF610P | |
| 620 | carbamoyl phosphate synthase large subunit | |||
| 970 | 5-methyltetrahydropteroyltriglutamate-- | |||
| 980 | M | M2.TruRU1ORF5445P (72% identity) | M.Tsa32279ORF980P | |
| 990 | R | Tsu2489ORF1691P (84% identity) | Tsa32279ORF980P | |
| 1000 | 174 aa hypothetical protein | |||
| 5740 | pseudouridine synthase | |||
| 5750 | M | M.TruRU1ORF160P (55% identity) | M.Tsa32279ORF5750P | |
| 5760 | 30S ribosomal protein S16 | |||
| 8190 | ATP-dependent helicase | |||
| 8200 | RM | Tsu2489ORF304P (49% identity) | Tsa32279ORF8200P | |
| 8210 | 176 aa hypothetical protein | |||
| plasmid pTS1 | ||||
| 21670 | 80 aa hypothetical protein | |||
| 21680 | RM | Tvi802ORF4930P (67% identity) | Tsa32279ORF21680P | |
| 21690 | RNA 2-phosphotransferase | |||
| 23390 | 146 aa hypothetical protein | |||
| 23400 | M | M2.Gme92ORFX4P (65% identity) | M1.Tsa32279ORF23400P | |
| 23410 | M | M1.Gme92ORFX4P (61% identity) | M2.Tsa32279ORF23400P | |
| 23420 | R | R1.TruRU1ORF1565P (35% identity) | R1.Tsa32279ORF23400P | |
| 23430 | R | R2.TruRU1ORF1565P (68% identity) | R2.Tsa32279ORF23400P | |
| 23440 | 71 aa hypothetical protein | |||
| 24580 | 326 aa hypothetical protein | |||
| 24590 | R | Tsu2489ORF695P (96% identity) | Tsa32279ORF24600P | |
| 24600 | M | M.Tsu2489ORF695P (92% identity) | M.Tsa32279ORF24600P | |
| 24610 | ABC transporter substrate-binding protein | |||
| 24910 | 57 aa hypothetical protein | |||
| 24920 | RM | PmeBin253ORFDP (69% identity) | Tsa32279ORF24930P | |
| 24930 | M | M2.OspW9097ORF1715P (71% identity) | M2.Tsa32279ORF24930P | |
| ??? | M | LbaGAM79ORFLAP (61% identity) | M1.Tsa32279ORF24930P | |
| 21340 | alpha/beta hydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8330 | 288 aa hypothetical protein | |||
| 8340 | M | M.Tsp906ORF12525P (43% identity) | M.Tsa32279ORF8340P | |
| 8350 | 136 aa hypothetical protein | |||
| 8360 | R | LspS1366ORF9930P (28% identity) | Tsa32279ORF8340P | |
| 8380 | 343 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 820 | NADPH-dependent butanol dehydrogenase | |||
| 830 | R | Pha202GmrSDP (24% identity) | Tsa32279GmrSDP | |
| 840 | 87 aa hypothetical protein | |||