Escherichia coli 64A:C |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 64A:C RM systems
Ref: Conquet,G. unpublished
REBASE ref # 37548
Complete sequence: 5,053,882 bp
GenBank #: CP134659
REBASE acronym: Eco64AC
Org_num: 71814
All begin RG014_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10755 | IS3 family transposase | |||
| 10760 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Eco64ACORF10760P |
| 10765 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Eco64ACORF10760P |
| 10770 | YecA family protein | |||
| 10775 | cold shock domain-containing protein | |||
| 10780 | R | Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | Eco64ACORF10760P |
| 10785 | SprT family zinc-dependent metalloprotease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2865 | cell division protein DamX | |||
| 2870 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco64ACDamP |
| 2875 | ribulose-phosphate 3-epimerase | |||
| 3395 | DUF2556 family protein | |||
| 3400 | M | M.Ecos142ORF2405P (100% identity) | ATGCAT | M.Eco64ACORF3400P |
| 3405 | DNA-binding transcriptional regulator Fis | |||
| 10500 | phosphohydrolase | |||
| 10505 | M | M.Ecos142DcmP (100% identity) | CCWGG | M.Eco64ACDcmP |
| 10510 | V | V.Ecos142DcmP (100% identity) | V.Eco64ACDcmP | |
| 10515 | drug/metabolite exporter YedA | |||
| 21195 | RM | EcoZ30ORF19095P (100% identity) | Eco64ACORF21195P | |
| 21200 | DEAD/DEAH box helicase | |||
| 21240 | HNH endonuclease | |||
| 21245 | R | Ecoppa2ORF12035P (100% identity) | Eco64ACORF21245P | |
| 21250 | 332 aa hypothetical protein | |||
| 21410 | osmoprotectant transport activator ProQ | |||
| 21415 | M | M.SflFF24DndBP (100% identity) | M.Eco64ACDndBP | |
| 21420 | DNA phosphorothioation system sulfurtransferase | |||
| 21415 | DNA sulfur modification protein DndB | |||
| 21420 | M | M.SflFF24DndCP (100% identity) | M.Eco64ACDndCP | |
| 21425 | DNA sulfur modification protein DndD | |||
| 21420 | DNA phosphorothioation system sulfurtransferase | |||
| 21425 | M | M.SflFF24DndDP (100% identity) | M.Eco64ACDndDP | |
| 21430 | DNA sulfur modification protein DndE | |||
| 21425 | DNA sulfur modification protein DndD | |||
| 21430 | M | M.SflFF24DndEP (100% identity) | M.Eco64ACDndEP | |
| 21435 | DGQHR domain-containing protein | |||
| 21445 | accessory gene regulator B family protein | |||
| 21450 | R | EcotcmA3DptHP (100% identity) | Eco64ACDptHP | |
| 21455 | DNA phosphorothioation-dependent restriction | |||
| 21450 | DNA phosphorothioation-dependent restriction | |||
| 21455 | R | SflFF24DptGP (100% identity) | Eco64ACDptGP | |
| 21460 | DNA phosphorothioation-dependent restriction | |||
| 21455 | DNA phosphorothioation-dependent restriction | |||
| 21460 | R | SflFF24DptFP (100% identity) | Eco64ACDptFP | |
| 21465 | IS5-like element ISKpn26 family transposase | |||