Escherichia coli M21170 |
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Putative Escherichia coli M21170 RM systems
Ref: Martino,F. unpublished
REBASE ref # 37507
| Sequence length: | GenBank #: | |
| Chromosome: | 5,268,591 bp | CP133919 |
| plasmid pEco_M21170_105: | 105,009 bp | CP133922 |
| plasmid pEco_M21170_247: | 247,558 bp | CP133920 |
REBASE acronym: Eco21170
Org_num: 71657
All begin RHT76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21450 | adenine/cytosine-specific restriction | |||
| 21455 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco21170ORF21460P |
| 21460 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco21170ORF21460P |
| 21465 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco21170ORF21460P |
| 21470 | endoribonuclease SymE | |||
| plasmid pEco_M21170_105 | ||||
| 27995 | DNA polymerase III subunit theta | |||
| 28000 | M | M.EcoNT1W25ORFEP (92% identity) | M.Eco21170ORF28000P | |
| 28005 | S | S.EcoWCTORF23260P (68% identity) | S.Eco21170ORF28000P | |
| 28010 | R | Eco88CORF24360P (99% identity) | Eco21170ORF28000P | |
| 28015 | 165 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2005 | cell division protein DamX | |||
| 2010 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco21170DamP |
| 2015 | ribulose-phosphate 3-epimerase | |||
| 2540 | DUF2556 family protein | |||
| 2545 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco21170ORF2545P |
| 2550 | DNA-binding transcriptional regulator Fis | |||
| 9415 | replication endonuclease | |||
| 9420 | M | M.Sbo812ORFEP (100% identity) | M.Eco21170ORF9420P | |
| 9425 | 330 aa hypothetical protein | |||
| 9430 | R | EcosEC21ORF7960P (100% identity) | Eco21170ORF9420P | |
| 9435 | phage portal protein | |||
| 10370 | HD domain-containing protein | |||
| 10375 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco21170DcmP |
| 10380 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.Eco21170DcmP |
| 10385 | drug/metabolite exporter YedA | |||
| plasmid pEco_M21170_247 | ||||
| 26130 | 55 aa hypothetical protein | |||
| 26135 | M | M.Eco244ORF2335P (100% identity) | M.Eco21170ORF26135P | |
| 26140 | thermonuclease family protein | |||
| 26755 | DNA-binding protein | |||
| 26760 | M | M.YpsF1ORFDP (95% identity) | M.Eco21170ORF26760P | |
| 26765 | 284 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21445 | GTPase | |||
| 21450 | R | EcosS1MrrP (100% identity) | Eco21170MrrP | |
| 21455 | type I restriction-modification system | |||
| 21470 | endoribonuclease SymE | |||
| 21475 | R | EcoUTGmrSD2P (52% identity) | Eco21170GmrDP | |
| 21480 | R | EcoSW4848GmrSDAP (100% identity) | Eco21170GmrSP | |
| 21485 | Rpn family recombination-promoting | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pEco_M21170_105 | ||||
| 28055 | 76 aa hypothetical protein | |||
| 28060 | M | M.Sso524ORF460P (100% identity) | GATC | M.Eco21170ORF28060P |
| 28065 | 269 aa hypothetical protein | |||