Escherichia coli TUM10828 |
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Putative Escherichia coli TUM10828 RM systems
Ref: Aoki,K. unpublished
REBASE ref # 37508
| Sequence length: | GenBank #: | |
| Chromosome: | 5,017,497 bp | CP134389 |
| plasmid pMTY10828_IncI1-I: | 90,263 bp | CP134392 |
| plasmid pMTY10828_p0111: | 100,058 bp | CP134391 |
REBASE acronym: Eco828
Org_num: 71627
All begin RJ643_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1905 | cell division protein DamX | |||
| 1910 | M | M.Ecos69DamP (100% identity) | GATC | M.Eco828DamP |
| 1915 | ribulose-phosphate 3-epimerase | |||
| 2435 | DUF2556 family protein | |||
| 2440 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.Eco828ORF2440P |
| 2445 | DNA-binding transcriptional regulator Fis | |||
| 4520 | superoxide dismutase [Cu-Zn] SodC | |||
| 4525 | R | SenS530DptFP (100% identity) | Eco828DptFP | |
| 4530 | DNA phosphorothioation-dependent restriction | |||
| 4525 | DNA phosphorothioation-dependent restriction | |||
| 4530 | R | SenI222DptGP (100% identity) | Eco828DptGP | |
| 4535 | DNA phosphorothioation-dependent restriction | |||
| 4530 | DNA phosphorothioation-dependent restriction | |||
| 4535 | R | SenS530DptHP (100% identity) | Eco828DptHP | |
| 4540 | DUF262 domain-containing protein | |||
| 4545 | AAA family ATPase | |||
| 4550 | M | M.SenS530DndEP (100% identity) | M.Eco828DndEP | |
| 4555 | DNA sulfur modification protein DndD | |||
| 4550 | DNA sulfur modification protein DndE | |||
| 4555 | M | M.SenS530DndDP (100% identity) | M.Eco828DndDP | |
| 4560 | DNA phosphorothioation system sulfurtransferase | |||
| 4555 | DNA sulfur modification protein DndD | |||
| 4560 | M | M.SenS530DndCP (100% identity) | M.Eco828DndCP | |
| 4565 | DNA sulfur modification protein DndB | |||
| 4560 | DNA phosphorothioation system sulfurtransferase | |||
| 4565 | M | M.SenS530DndBP (100% identity) | M.Eco828DndBP | |
| 4570 | DNA-binding protein | |||
| 7135 | DUF1382 family protein | |||
| 7140 | M | M.Eco9004ORF1510P (98% identity) | M.Eco828ORF7140P | |
| 7145 | PerC family transcriptional regulator | |||
| 10145 | phosphohydrolase | |||
| 10150 | M | M.EcosPA11DcmP (100% identity) | CCWGG | M.Eco828DcmP |
| 10155 | V | V.EcosPA11DcmP (100% identity) | V.Eco828DcmP | |
| 10160 | drug/metabolite exporter YedA | |||
| plasmid pMTY10828_IncI1-I | ||||
| 25525 | 70 aa hypothetical protein | |||
| 25530 | M | M.SenBR027ORFEP (100% identity) | SAY | M.Eco828ORF25530P |
| 25535 | 73 aa hypothetical protein | |||
| plasmid pMTY10828_p0111 | ||||
| 25120 | TerB family tellurite resistance protein | |||
| 25135 | M | M.EcoH8ORF24485P (100% identity) | M.Eco828ORF25135P | |
| 25140 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20385 | GTPase | |||
| 20390 | R | EcosS1MrrP (100% identity) | Eco828MrrP | |
| 20395 | type I restriction-modification system | |||
| 20410 | endoribonuclease SymE | |||
| 20415 | R | EcoUTGmrSD2P (52% identity) | Eco828GmrDP | |
| 20420 | R | EcoSW4848GmrSDAP (100% identity) | Eco828GmrSP | |
| 20425 | Rpn family recombination-promoting | |||