Escherichia coli TUM11352 |
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Putative Escherichia coli TUM11352 RM systems
Ref: Aoki,K. unpublished
REBASE ref # 37508
| Sequence length: | GenBank #: | |
| Chromosome: | 4,893,245 bp | CP134384 |
| plasmid pMTY11352_IncI1-I: | 94,712 bp | CP134386 |
REBASE acronym: Eco352
Org_num: 71628
All begin RJ650_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18355 | type IV toxin-antitoxin system AbiEi family | |||
| 18360 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco352ORF18365P |
| 18365 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco352ORF18365P |
| 18370 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco352ORF18365P |
| 18375 | ash family protein | |||
| 20200 | DUF262 domain-containing protein | |||
| 20205 | M | M.EcoZ247ORF19790P (100% identity) | M.Eco352ORF20205P | |
| 20210 | S | S.EcoZ247ORF19790P (100% identity) | S.Eco352ORF20205P | |
| 20215 | R | EcoZ247ORF19790P (100% identity) | Eco352ORF20205P | |
| 20220 | 237 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1690 | cell division protein DamX | |||
| 1695 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco352DamP |
| 1700 | ribulose-phosphate 3-epimerase | |||
| 2290 | DUF2556 family protein | |||
| 2295 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco352ORF2295P |
| 2300 | DNA-binding transcriptional regulator Fis | |||
| 5945 | PerC family transcriptional regulator | |||
| 5950 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco352ORF5950P |
| 5955 | LexA family transcriptional regulator | |||
| 5985 | 67 aa hypothetical protein | |||
| 5990 | M | M.SflLIN17ORF17405P (100% identity) | M.Eco352ORF5990P | |
| 5995 | phage holin, lambda family | |||
| 9490 | phosphohydrolase | |||
| 9495 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco352DcmP |
| 9500 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco352DcmP |
| 9505 | drug/metabolite exporter YedA | |||
| 20560 | 165 aa hypothetical protein | |||
| 20565 | R | EcoW004ORF18630P (100% identity) | GAAC | Eco352ORF20565P |
| 20570 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pMTY11352_IncI1-I | ||||
| 24790 | 70 aa hypothetical protein | |||
| 24795 | M | M.SenBR027ORFEP (100% identity) | SAY | M.Eco352ORF24795P |
| 24800 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20190 | cell filamentation protein Fic | |||
| ??? | R | EcoW004GmrDP (100% identity) | Eco352GmrSDP | |
| 20205 | class I SAM-dependent DNA methyltransferase | |||