Riemerella anatipestifer SX-1 |
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Putative Riemerella anatipestifer SX-1 RM systems
Ref: Wang,Y. et al. unpublished
REBASE ref # 37525
Complete sequence: 2,112,539 bp
GenBank #: CP134070
REBASE acronym: RanSX1
Org_num: 71701
All begin RI061_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4900 | IS982-like element ISRa1 family transposase | |||
| 4905 | M | M.RanYb2ORF9240P (100% identity) | RTANNNNNNRTCG | M.RanSX1ORF4905P |
| 4910 | S | S.RanYb2ORF9240P (100% identity) | RTANNNNNNRTCG | S.RanSX1ORF4905P |
| 4915 | R | RanYb2ORF9240P (100% identity) | RTANNNNNNRTCG | RanSX1ORF4905P |
| 4920 | endonuclease/exonuclease/phosphatase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2365 | 128 aa hypothetical protein | |||
| ??? | RM | RanYb2ORF5990P (100% identity) | GAAAGAG | RanSX1ORF2370P |
| 2380 | 213 aa hypothetical protein | |||
| 3080 | glycine--tRNA ligase | |||
| 3085 | M | M.Ran15868CDndAP (100% identity) | M.RanSX1DndAP | |
| 3090 | 318 aa hypothetical protein | |||
| 5190 | 187 aa hypothetical protein | |||
| 5195 | M | M1.RanYb2ORF9550P (100% identity) | GGATG | M1.RanSX1ORF5195P |
| 5200 | M | M2.RanYb2ORF9550P (100% identity) | GGATG | M2.RanSX1ORF5195P |
| 5205 | R | RanYb2ORF9550P (100% identity) | GGATG | RanSX1ORF5195P |
| 5210 | DNA-binding domain-containing protein | |||
| 5370 | 125 aa hypothetical protein | |||
| 5375 | M | M1.RanYb2ORF9770P (100% identity) | GATC | M.RanSX1ORF5375P |
| 5380 | type II restriction endonuclease | |||
| 5375 | DNA adenine methylase | |||
| 5380 | R | RanYb2ORF9770P (100% identity) | GATC | RanSX1ORF5385P |
| 5385 | M | M2.RanYb2ORF9770P (100% identity) | GATC | M.RanSX1ORF5385P |
| 5390 | GLPGLI family protein | |||
| 8640 | universal stress protein | |||
| 8645 | M | M.RanYMDndCP (100% identity) | GAAC | M.RanSX1DndCP |
| 8650 | DNA sulfur modification protein DndD | |||
| 8645 | DNA phosphorothioation system sulfurtransferase | |||
| 8650 | M | M.RanYMDndDP (100% identity) | GAAC | M.RanSX1DndDP |
| 8655 | DndE family protein | |||
| 8650 | DNA sulfur modification protein DndD | |||
| 8655 | M | M.RanYMDndEP (100% identity) | GAAC | M.RanSX1DndEP |
| 8660 | HmuY family protein | |||