Escherichia coli AHS8C65RI |
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Putative Escherichia coli AHS8C65RI RM systems
Ref: Gao,G. unpublished
REBASE ref # 37504
Complete sequence: 5,080,150 bp
GenBank #: CP125885
REBASE acronym: Eco65R
Org_num: 71598
All begin QMY05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4200 | transposase | |||
| 4205 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Eco65RORF4210P |
| 4210 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eco65RORF4210P |
| 4215 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco65RORF4210P |
| 4220 | AAA family ATPase | |||
| 20835 | 128 aa hypothetical protein | |||
| 20840 | M | M.EcosC41ORF5210P (100% identity) | GCAGNNNNNTGT | M.Eco65RORF20840P |
| 20845 | S | S.EcosC41ORF5210P (98% identity) | GCAGNNNNNTGT | S.Eco65RORF20840P |
| 20850 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1680 | cell division protein DamX | |||
| 1685 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco65RDamP |
| 1690 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco65RORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 3300 | DEAD/DEAH box helicase | |||
| 3305 | RM | SflLIN17ORF3140P (100% identity) | Eco65RORF3305P | |
| 3310 | transposase | |||
| 9900 | phosphohydrolase | |||
| 9905 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco65RDcmP |
| 9910 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco65RDcmP |
| 9915 | drug/metabolite exporter YedA | |||
| 17410 | 63 aa hypothetical protein | |||
| 17415 | M | M.EcoECO21ORF16295P (100% identity) | M.Eco65RORF17415P | |
| 17420 | TrmB family transcriptional regulator | |||
| 20815 | HNH endonuclease | |||
| 20820 | R | EcosC41ORF5230P (100% identity) | Eco65RORF20820P | |
| 20825 | AAA family ATPase | |||
| 21790 | DNA-binding protein | |||
| 21795 | M | M.SenS530DndBP (100% identity) | M.Eco65RDndBP | |
| 21800 | DNA phosphorothioation system sulfurtransferase | |||
| 21795 | DNA sulfur modification protein DndB | |||
| 21800 | M | M.SenS530DndCP (100% identity) | M.Eco65RDndCP | |
| 21805 | DNA sulfur modification protein DndD | |||
| 21800 | DNA phosphorothioation system sulfurtransferase | |||
| 21805 | M | M.SenS530DndDP (100% identity) | M.Eco65RDndDP | |
| 21810 | DNA sulfur modification protein DndE | |||
| 21805 | DNA sulfur modification protein DndD | |||
| 21810 | M | M.SenS530DndEP (100% identity) | M.Eco65RDndEP | |
| 21815 | AAA family ATPase | |||
| 21820 | DUF262 domain-containing protein | |||
| 21825 | R | SenS530DptHP (100% identity) | Eco65RDptHP | |
| 21830 | DNA phosphorothioation-dependent restriction | |||
| 21825 | DNA phosphorothioation-dependent restriction | |||
| 21830 | R | SenI222DptGP (100% identity) | Eco65RDptGP | |
| 21835 | DNA phosphorothioation-dependent restriction | |||
| 21830 | DNA phosphorothioation-dependent restriction | |||
| 21835 | R | SenS530DptFP (100% identity) | Eco65RDptFP | |
| 21840 | superoxide dismutase [Cu-Zn] SodC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20820 | HNH endonuclease | |||
| 20825 | R | SflN101McrBP (99% identity) | Eco65RMcrBP | |
| 20830 | R | Ecows53McrCP (100% identity) | Eco65RMcrCP | |
| 20835 | 128 aa hypothetical protein | |||