Escherichia coli 130 |
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Putative Escherichia coli 130 RM systems
Ref: El Aila,N.A. et al. unpublished
REBASE ref # 37121
Complete sequence: 4,825,020 bp
GenBank #: CP133644
REBASE acronym: Eco30
Org_num: 71596
All begin QT508_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4975 | endoribonuclease SymE | |||
| 4980 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | Eco30ORF4990P |
| 4985 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.Eco30ORF4990P |
| 4990 | M | M.Ecost88ORF20845P (99% identity) | GGYANNNNNGTNG | M.Eco30ORF4990P |
| 4995 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2990 | cell division protein DamX | |||
| 2995 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco30DamP |
| 3000 | ribulose-phosphate 3-epimerase | |||
| 8620 | DUF2556 family protein | |||
| 8625 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco30ORF8625P |
| 8630 | DNA-binding transcriptional regulator Fis | |||
| 16015 | LexA family transcriptional regulator | |||
| 16020 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco30ORF16020P |
| 16025 | PerC family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4990 | class I SAM-dependent DNA methyltransferase | |||
| 4995 | R | Ecost88MrrP (100% identity) | Eco30MrrP | |
| 5000 | 34 aa hypothetical protein | |||
| 24250 | isocitrate/isopropylmalate family dehydrogenase | |||
| 24255 | R | EfeEF02ORF213200P (100% identity) | YCGR | Eco30ORF24255P |
| 24260 | helix-turn-helix domain-containing protein | |||