Rothia dentocariosa B-8017 |
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Putative Rothia dentocariosa B-8017 RM systems
Ref: Damerum,A. unpublished
REBASE ref # 36200
Complete sequence: 2,462,892 bp
GenBank #: CP133473
REBASE acronym: RdeB8017
Org_num: 71483
All begin RDV56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2900 | bifunctional hydroxymethylpyrimidine | |||
| 2905 | R | RdeGBORF11858P (100% identity) | GAYNNNNNNTGG | RdeB8017ORF2925P |
| 2910 | 3-5 exonuclease | |||
| 2915 | 104 aa hypothetical protein | |||
| 2920 | S | S.RdeGBORF11858P (100% identity) | GAYNNNNNNTGG | S.RdeB8017ORF2925P |
| 2925 | M | M.RdeGBORF11858P (100% identity) | GAYNNNNNNTGG | M.RdeB8017ORF2925P |
| 2930 | NAD(P)H-dependent oxidoreductase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5205 | 212 aa hypothetical protein | |||
| 5210 | RM | RdeGBI (100% identity) | CCGCAG | RdeB8017ORF5210P |
| 5215 | porphobilinogen synthase | |||
| 5260 | DEAD/DEAH box helicase | |||
| 5265 | M | M.RdeGBORF10120P (100% identity) | TTAA | M.RdeB8017ORF5265P |
| 5270 | PHP domain-containing protein | |||
| 7540 | MetQ/NlpA family ABC transporter | |||
| 7545 | RM | RdeGBIII (100% identity) | TGRYCA | RdeB8017ORF7545P |
| 7550 | 269 aa hypothetical protein | |||
| 9135 | methylated-DNA--[protein]-cysteine | |||
| 9140 | RM | RdeGBII (100% identity) | ACCCAG | RdeB8017ORF9140P |
| 9145 | ABC transporter ATP-binding protein | |||