Escherichia fergusonii 18B269LT |
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Putative Escherichia fergusonii 18B269LT RM systems
Ref: Kakita,T. et al. unpublished
REBASE ref # 37455
| Sequence length: | GenBank #: | |
| Chromosome: | 4,537,950 bp | AP028827 |
| plasmid p18B269LT2: | 122,823 bp | AP028829 |
| plasmid p18B269LT3: | 95,446 bp | AP028830 |
REBASE acronym: Efe9LT
Org_num: 71416
All begin Ef18B269LT_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 32720 | 48 aa hypothetical protein | |||
| 32730 | S | S.SflN101ORF19075P (100% identity) | GAACNNNNNTGC | S.Efe9LTORF32740P |
| 32740 | M | M.Sen6640ORF2690P (100% identity) | GAACNNNNNTGC | M.Efe9LTORF32740P |
| 32750 | R | EmaC12ORF18910P (100% identity) | GAACNNNNNTGC | Efe9LTORF32740P |
| 32760 | 74 aa hypothetical protein | |||
| 34960 | 119 aa hypothetical protein | |||
| 34970 | R | Efe7LTORF35050P (100% identity) | Efe9LTORF34980P | |
| 34980 | M | M.SflTORF4636P (98% identity) | M.Efe9LTORF34980P | |
| 34990 | S | S.Efe7LTORF35050P (100% identity) | S.Efe9LTORF34980P | |
| 35000 | endoribonuclease SymE | |||
| plasmid p18B269LT2 | ||||
| 43970 | 75 aa hypothetical protein | |||
| 43980 | M | M.Efe7LTORF43470P (99% identity) | GAGNNNNNRTGA | M.Efe9LTORF43980P |
| 43990 | S | S.Efe5LTORF44110P (100% identity) | GAGNNNNNRTGA | S.Efe9LTORF43980P |
| 44000 | R | Efe7LTORF43470P (100% identity) | GAGNNNNNRTGA | Efe9LTORF43980P |
| 44010 | 168 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2240 | bifunctional isocitrate dehydrogenase | |||
| 2250 | M | M.EfeTORF2210P (100% identity) | CCWGG | M.Efe9LTORF2250P |
| 2260 | glyoxylate bypass operon transcriptional | |||
| 25340 | DNA-binding protein | |||
| 25350 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Efe9LTORF25350P |
| 25360 | 200 aa hypothetical protein | |||
| 35150 | anti-phage ZorAB system protein ZorA | |||
| 35160 | M | M.Efe7LTDndBP (100% identity) | M.Efe9LTDndBP | |
| 35170 | DNA phosphorothioation system sulfurtransferase | |||
| 35160 | DNA sulfur modification protein DndB | |||
| 35170 | M | M.Efe7LTDndCP (100% identity) | M.Efe9LTDndCP | |
| 35180 | DNA sulfur modification protein DndD | |||
| 35170 | DNA phosphorothioation system sulfurtransferase | |||
| 35180 | M | M.Efe7LTDndDP (100% identity) | M.Efe9LTDndDP | |
| 35190 | 117 aa hypothetical protein | |||
| 35180 | DNA sulfur modification protein DndD | |||
| 35190 | M | M.Efe7LTDndEP (100% identity) | M.Efe9LTDndEP | |
| 35200 | DGQHR domain-containing protein | |||
| 35210 | 174 aa hypothetical protein | |||
| 35220 | R | Efe7LTDptHP (100% identity) | Efe9LTDptHP | |
| 35230 | 440 aa hypothetical protein | |||
| 35220 | 1695 aa hypothetical protein | |||
| 35230 | R | Efe7LTDptGP (100% identity) | Efe9LTDptGP | |
| 35240 | 549 aa hypothetical protein | |||
| 35230 | 440 aa hypothetical protein | |||
| 35240 | R | Efe7LTDptFP (100% identity) | Efe9LTDptFP | |
| 35250 | integrase arm-type DNA-binding domain-containing | |||
| 36510 | DNA-binding transcriptional regulator Fis | |||
| 36520 | M | M.EfeTORF37040P (100% identity) | ATGCAT | M.Efe9LTORF36520P |
| 36530 | DUF2556 family protein | |||
| 37500 | ribulose-phosphate 3-epimerase | |||
| 37510 | M | M.EfeEF04DamP (100% identity) | GATC | M.Efe9LTDamP |
| 37520 | cell division protein DamX | |||
| plasmid p18B269LT2 | ||||
| 44200 | 97 aa hypothetical protein | |||
| 44210 | M | M.Efe7LTORF44250P (100% identity) | M.Efe9LTORF44210P | |
| 44220 | recombination-associated protein RdgC | |||
| plasmid p18B269LT3 | ||||
| 44690 | DUF1281 domain-containing protein | |||
| 44700 | M | M.SspPIBORF23080P (100% identity) | M.Efe9LTORF44700P | |
| 44710 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 35000 | endoribonuclease SymE | |||
| 35010 | R | Efe7LTGmrSDP (100% identity) | Efe9LTGmrSDP | |
| 35020 | DUF1127 domain-containing protein | |||
| 35070 | DUF445 domain-containing protein | |||
| 35090 | R | Efe7LTMrrP (100% identity) | Efe9LTMrrP | |
| 35100 | 228 aa hypothetical protein | |||