Fusobacterium nucleatum S-P11 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Fusobacterium nucleatum S-P11 RM systems
Ref: Shimomura,Y. et al. unpublished
REBASE ref # 37456
Complete sequence: 2,561,063 bp
GenBank #: AP028644
REBASE acronym: FnuSP11
Org_num: 71429
All begin FNSP11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6730 | metal ABC transporter permease | |||
| 6740 | M | M.FnuCP11ORF7540P (100% identity) | M.FnuSP11ORF6740P | |
| 6750 | S | S1.FnuCP11ORF7540P (94% identity) | S1.FnuSP11ORF6740P | |
| 6760 | S | S2.FnuCP11ORF7540P (95% identity) | S2.FnuSP11ORF6740P | |
| 6770 | S | S3.FnuCP11ORF7540P (100% identity) | S3.FnuSP11ORF6740P | |
| 6780 | tyrosine-type recombinase/integrase | |||
| 6790 | R | FnuCP11ORF7540P (100% identity) | FnuSP11ORF6740P | |
| 6800 | metalloregulator ArsR/SmtB family transcription | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2560 | type II toxin-antitoxin system RelE/ParE family | |||
| 2570 | M | M1.FnuCP11ORF3370P (100% identity) | M1.FnuSP11ORF2570P | |
| 2580 | M | M2.FnuCP11ORF3370P (100% identity) | M2.FnuSP11ORF2570P | |
| 2590 | 482 aa hypothetical protein | |||
| 3970 | 56 aa hypothetical protein | |||
| 3980 | M | M.FnuCP11ORF4780P (100% identity) | M.FnuSP11ORF3980P | |
| 3990 | 95 aa hypothetical protein | |||
| 8610 | helix-turn-helix domain-containing protein | |||
| 8620 | RM | FnuCP11ORF9430P (100% identity) | FnuSP11ORF8630P | |
| 8630 | M | M.FnuSP4ORF13980P (100% identity) | CAAGAT | M.FnuSP11ORF8630P |
| 8640 | ATP-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24340 | DEAD/DEAH box helicase | |||
| 24350 | R | FnuCP11ORF540P (100% identity) | FnuSP11ORF24350P | |
| 24360 | RidA family protein | |||