Thiothrix lacustris MK1 |
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Putative Thiothrix lacustris MK1 RM systems
Ref: Ravin,N.V. et al. unpublished
REBASE ref # 37434
| Sequence length: | GenBank #: | |
| Chromosome: | 3,612,515 bp | CP133218 |
| plasmid pThlacMK1_1: | 21,587 bp | CP133219 |
| plasmid pThlacMK1_2: | 13,540 bp | CP133220 |
REBASE acronym: TlaMK1
Org_num: 71345
All begin RCF98_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 285 | methyltransferase domain-containing protein | |||
| 290 | S | S2.KpnKp321ORF23045P (51% identity) | S2.TlaMK1ORF330P | |
| 295 | 73 aa hypothetical protein | |||
| 300 | R | Tla21227ORFBP (83% identity) | TlaMK1ORF330P | |
| 305 | adenosine monophosphate-protein | |||
| 310 | DUF2559 family protein | |||
| 315 | DUF262 domain-containing HNH endonuclease family | |||
| 320 | DUF262 domain-containing protein | |||
| 325 | S | S.AbaBsC2I (41% identity) | S1.TlaMK1ORF330P | |
| 330 | M | M.TspASORF5175P (99% identity) | M.TlaMK1ORF330P | |
| 335 | FAD-dependent oxidoreductase | |||
| 1510 | PDDEXK nuclease domain-containing protein | |||
| 1515 | M | M.Tla21227ORFQP (99% identity) | M.TlaMK1ORF1515P | |
| 1520 | S | S1.NspPLL12ORF7920P (40% identity) | S1.TlaMK1ORF1515P | |
| 1525 | S | S.TspKTORF12835P (98% identity) | S2.TlaMK1ORF1515P | |
| 1530 | 89 aa hypothetical protein | |||
| 1535 | IS3 family transposase | |||
| 1540 | DUF5615 family PIN-like protein | |||
| 1545 | DUF433 domain-containing protein | |||
| 1550 | DUF3368 domain-containing protein | |||
| 1555 | UPF0175 family protein | |||
| 1560 | R | TspKTORF12835P (95% identity) | TlaMK1ORF1515P | |
| 1565 | histidine kinase | |||
| 7980 | PAS domain S-box protein | |||
| 7985 | R | Tla21227ORFGP (99% identity) | TlaMK1ORF8010P | |
| 7990 | DUF559 domain-containing protein | |||
| 7995 | HNH endonuclease signature motif containing | |||
| 8000 | 133 aa hypothetical protein | |||
| 8005 | S | S.Mle45370ORF7870P (41% identity) | S.TlaMK1ORF8010P | |
| 8010 | M | M.Tla21227ORFGP (92% identity) | M.TlaMK1ORF8010P | |
| 8015 | 75 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 130 | 122 aa hypothetical protein | |||
| 135 | RM | Tla21227ORFHP (70% identity) | TlaMK1ORF135P | |
| 140 | toxin-antitoxin system toxin component, | |||
| 1340 | AAA-like domain-containing protein | |||
| 1345 | RM | TmaM1ORF16640P (59% identity) | TlaMK1ORF1345P | |
| 1350 | BREX system P-loop protein BrxC | |||
| 4925 | 5-3 exonuclease H3TH domain-containing | |||
| 4930 | RM | TspQ5ORF4480P (95% identity) | TlaMK1ORF4930P | |
| 4935 | type II toxin-antitoxin system VapB family | |||
| 5105 | 204 aa hypothetical protein | |||
| 5110 | RM | TlaWSORF13640P (90% identity) | TlaMK1ORF5110P | |
| 5115 | AAA family ATPase | |||
| 6925 | HIT family protein | |||
| 6930 | R | TlaWSORF12005P (99% identity) | TlaMK1ORF6930P | |
| 6935 | nuclease-related domain-containing protein | |||
| 6970 | 223 aa hypothetical protein | |||
| 6975 | M | M.TmoRTORF4275P (91% identity) | M.TlaMK1ORF6975P | |
| 6980 | R | TmoRTORF4275P (93% identity) | TlaMK1ORF6975P | |
| 6985 | helix-turn-helix transcriptional regulator | |||
| 7700 | Uma2 family endonuclease | |||
| ??? | RM | Tla21227ORFPP (76% identity) | TlaMK1ORF7705P | |
| 7710 | ATP-binding protein | |||
| 7955 | 215 aa hypothetical protein | |||
| 7960 | M | M.TspKTORF250P (97% identity) | M.TlaMK1ORF7960P | |
| 7965 | R | TlaWSORF9030P (100% identity) | TlaMK1ORF7960P | |
| 7970 | asparagine synthase-related protein | |||
| 9515 | Fic family protein | |||
| 9520 | R | Tca21228ORF770P (95% identity) | TlaMK1ORF9520P | |
| 9525 | FKBP-type peptidyl-prolyl cis-trans isomerase | |||
| 9760 | DEAD/DEAH box helicase | |||
| 9765 | R | Tla21227ORFMP (100% identity) | TlaMK1ORF9770P | |
| 9770 | M | M.Tla21227ORFMP (99% identity) | M.TlaMK1ORF9770P | |
| 9775 | quinolinate synthase NadA | |||
| 10175 | ribonucleoside-diphosphate reductase subunit | |||
| 10180 | R | TspQ5ORF10405P (94% identity) | R1.TlaMK1ORF10185P | |
| 10185 | M | M1.TlaWSORF11255P (99% identity) | M1.TlaMK1ORF10185P | |
| 10190 | R | R2.TlaWSORF11255P (99% identity) | R2.TlaMK1ORF10185P | |
| 10195 | R | R3.TlaWSORF11255P (100% identity) | R3.TlaMK1ORF10185P | |
| 10200 | M | M2.TlaWSORF11255P (98% identity) | M2.TlaMK1ORF10185P | |
| 10205 | ribonucleotide-diphosphate reductase subunit | |||
| 10385 | lipopolysaccharide heptosyltransferase II | |||
| 10390 | M | M.TspASORF14715P (98% identity) | M.TlaMK1ORF10390P | |
| 10395 | R | TspASORF14715P (95% identity) | TlaMK1ORF10390P | |
| 10400 | nucleotidyltransferase substrate | |||
| plasmid pThlacMK1_1 | ||||
| 17565 | replication initiation protein | |||
| 17570 | RM | TspQ5ORF19890P (86% identity) | TlaMK1ORF17570P | |
| 17575 | DNA-binding protein | |||
| plasmid pThlacMK1_2 | ||||
| 17660 | type B 50S ribosomal protein L31 | |||
| 17665 | M | M.Val98ORF14310P (66% identity) | M.TlaMK1ORF17665P | |
| 17670 | HaeIII family restriction endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12830 | 81 aa hypothetical protein | |||
| 12835 | R | TspASMrrP (99% identity) | TlaMK1MrrP | |
| 12840 | GlsB/YeaQ/YmgE family stress response membrane | |||