Escherichia coli O157:H7 PNUSAE146744 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O157:H7 PNUSAE146744 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
| Sequence length: | GenBank #: | |
| Chromosome: | 5,394,800 bp | CP133130 |
| plasmid unnamed1: | 92,740 bp | CP133132 |
| plasmid unnamed2: | 63,329 bp | CP133131 |
REBASE acronym: Eco744
Org_num: 71264
All begin RB263_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23470 | DUF262 domain-containing protein | |||
| 23475 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco744ORF23480P |
| 23480 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco744ORF23480P |
| 23485 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco744ORF23480P |
| 23490 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2085 | cell division protein DamX | |||
| 2090 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco744DamP |
| 2095 | ribulose-phosphate 3-epimerase | |||
| 2600 | DUF2556 family protein | |||
| 2605 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco744ORF2605P |
| 2610 | DNA-binding transcriptional regulator Fis | |||
| 8560 | recombination protein NinB | |||
| 8565 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco744ORF8565P |
| 8570 | NinE family protein | |||
| 9955 | phosphohydrolase | |||
| 9960 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco744DcmP |
| 9965 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco744DcmP |
| 9970 | drug/metabolite exporter YedA | |||
| 13770 | DUF1367 family protein | |||
| 13775 | R | Ecos15739ORF2910P (100% identity) | Eco744ORF13785P | |
| 13780 | 329 aa hypothetical protein | |||
| 13785 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco744ORF13785P | |
| 13790 | 35 aa hypothetical protein | |||
| 14660 | DUF1737 domain-containing protein | |||
| 14675 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco744ORF14675P | |
| 14680 | TrmB family transcriptional regulator | |||
| 23705 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco744ORF23705P |
| 23710 | DEAD/DEAH box helicase | |||
| plasmid unnamed1 | ||||
| 27475 | 101 aa hypothetical protein | |||
| 27480 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco744ORF27480P | |
| 27485 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 26960 | NinE family protein | |||
| 26965 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco744ORF26965P |
| 26970 | recombination protein NinB | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23490 | endoribonuclease SymE | |||
| 23495 | R | EcosPA8GmrSDP (55% identity) | Eco744GmrDP | |
| 23500 | R | Ecos1613GmrSP (100% identity) | Eco744GmrSP | |
| 23505 | cytoplasmic protein | |||