Escherichia coli O157:H7 PNUSAE145590 |
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Putative Escherichia coli O157:H7 PNUSAE145590 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
| Sequence length: | GenBank #: | |
| Chromosome: | 5,572,664 bp | CP133120 |
| plasmid unnamed1: | 92,689 bp | CP133121 |
REBASE acronym: Eco5590
Org_num: 71259
All begin RB261_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25110 | DUF262 domain-containing protein | |||
| 25115 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco5590ORF25120P |
| 25120 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco5590ORF25120P |
| 25125 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco5590ORF25120P |
| 25130 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2455 | cell division protein DamX | |||
| 2460 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco5590DamP |
| 2465 | ribulose-phosphate 3-epimerase | |||
| 2970 | DUF2556 family protein | |||
| 2975 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco5590ORF2975P |
| 2980 | DNA-binding transcriptional regulator Fis | |||
| 8935 | recombination protein NinB | |||
| 8940 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco5590ORF8940P |
| 8945 | NinE family protein | |||
| 10330 | phosphohydrolase | |||
| 10335 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco5590DcmP |
| 10340 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco5590DcmP |
| 10345 | drug/metabolite exporter YedA | |||
| 14495 | DUF1367 family protein | |||
| 14500 | R | Ecos15739ORF2910P (100% identity) | Eco5590ORF14510P | |
| 14505 | 329 aa hypothetical protein | |||
| 14510 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco5590ORF14510P | |
| 14515 | 35 aa hypothetical protein | |||
| 15385 | DUF1737 domain-containing protein | |||
| 15400 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco5590ORF15400P | |
| 15405 | TrmB family transcriptional regulator | |||
| 18295 | phage antirepressor Ant | |||
| ??? | M | M.EcoX21ORFCP (100% identity) | GATC | M.Eco5590ORF18300P |
| 18310 | recombination protein NinB | |||
| 18755 | phage antirepressor Ant | |||
| ??? | M | M.EcoX21ORFCP (100% identity) | GATC | M.Eco5590ORF18760P |
| 18770 | recombination protein NinB | |||
| 25345 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco5590ORF25345P |
| 25350 | DEAD/DEAH box helicase | |||
| 25380 | N-acetylneuraminic acid mutarotase | |||
| 25385 | R | Ecos1613ORF26795P (100% identity) | Eco5590ORF25385P | |
| 25390 | transposase | |||
| plasmid unnamed1 | ||||
| 28705 | 101 aa hypothetical protein | |||
| 28710 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco5590ORF28710P | |
| 28715 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25130 | endoribonuclease SymE | |||
| 25135 | R | EcosPA8GmrSDP (55% identity) | Eco5590GmrDP | |
| 25140 | R | Ecos1613GmrSP (100% identity) | Eco5590GmrSP | |
| 25145 | cytoplasmic protein | |||