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Putative Neisseria meningitidis NIID838 RM systems
Ref: Takahashi,H. et al. unpublished
REBASE ref # 37385
Complete sequence: 2,178,312 bp
GenBank #: AP028683
REBASE acronym: Nme838
Org_num: 71199
All begin NmNIID838_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3500 | phenylalanine--tRNA ligase subunit alpha | |||
3510 | V | V.NmeS4ORFGP (100% identity) | RCCGGY | V.Nme838ORF3520P |
3520 | M | M.NmeS4ORFGP (76% identity) | M.Nme838ORF3520P | |
3530 | R | NmeS4ORFGP (100% identity) | RCCGGY | Nme838ORF3520P |
3540 | phenylalanine--tRNA ligase subunit beta | |||
4410 | ADP-heptose synthase | |||
4420 | M | M.NmeS4ORFEP (100% identity) | CCAGA | M.Nme838ORF4420P |
4430 | R | NmeS4ORFEP (98% identity) | CCAGA | Nme838ORF4420P |
4440 | ADP-glyceromanno-heptose 6-epimerase | |||
7520 | 3-isopropylmalate dehydrogenase | |||
7530 | R | NmeS4ORFHP (100% identity) | GGNNCC | R1.Nme838ORF7550P |
7540 | R | NmeW135ORF659P (21% identity) | GGNNCC | R2.Nme838ORF7550P |
??? | M | M.Nme835ORF7490P (100% identity) | GGNNCC | M.Nme838ORF7550P |
7580 | 3-isopropylmalate dehydratase small subunit | |||
11740 | alanine--tRNA ligase | |||
11750 | R | NmeS4ORFCP (100% identity) | GCGCGC | Nme838ORF11760P |
11760 | M | M.NmeS4ORFCP (100% identity) | GCGCGC | M.Nme838ORF11760P |
11770 | 101 aa hypothetical protein | |||
16190 | DUF3418 domain-containing protein | |||
??? | V | V.NmeS4ORFFP (100% identity) | V.Nme838ORF16220P | |
16210 | R | NmeS4ORFFP (100% identity) | CCGG | Nme838ORF16220P |
16220 | M | M.NmeS4ORFFP (94% identity) | CCGG | M.Nme838ORF16220P |
16230 | IS30-like element IS1655 family transposase | |||
20340 | 61 aa hypothetical protein | |||
20350 | M | M.NmeM395I (100% identity) | CCTTC | M.Nme838ORF20350P |
20360 | 92 aa hypothetical protein | |||
20370 | IS30-like element IS1655 family transposase | |||
20380 | R | R2.NmeS4ORFBP (100% identity) | CCTTC | Nme838ORF20350P |
20390 | 123 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
6360 | alpha-hydroxy acid oxidase | |||
6370 | R | NmeS4ORFDP (100% identity) | Nme838ORF6380P | |
6380 | M | M.NmeS4ORFDP (66% identity) | M.Nme838ORF6380BP | |
6390 | M | M.NmeS4ORFDP (21% identity) | M.Nme838ORF6380AP | |
6400 | tRNA pseudouridine(55) synthase TruB | |||
7410 | peptidylprolyl isomerase | |||
7420 | M | M.Nme77ORF1599P (99% identity) | M.Nme838ORF7420P | |
7430 | R | NmeS4ORFIP (100% identity) | Nme838ORF7420P | |
7440 | tRNA 2-thiocytidine(32) synthetase TtcA |