Escherichia coli R7 |
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Putative Escherichia coli R7 RM systems
Ref: Jaen-Luchoro,D. et al. Microorganisms 11 (7), 1622 (2023)
REBASE ref # 37298
| Sequence length: | GenBank #: | |
| Chromosome: | 5,118,568 bp | CP107174 |
| plasmid pR7-S2K78-1: | 111,932 bp | CP107175 |
REBASE acronym: EcosR7
Org_num: 69868
All begin OGM36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4920 | restriction endonuclease | |||
| 4925 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcosR7ORF4925P |
| 4930 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcosR7ORF4925P |
| 4935 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcosR7ORF4925P |
| 4940 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5265 | McrC family protein | |||
| 5270 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcosR7ORF5275P |
| 5275 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcosR7ORF5275P |
| 5280 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcosR7ORF5275P |
| 5285 | helix-turn-helix domain-containing protein | |||
| 10820 | cell division protein DamX | |||
| 10825 | M | M.SspPIBDamP (100% identity) | GATC | M.EcosR7DamP |
| 10830 | ribulose-phosphate 3-epimerase | |||
| 11420 | DUF2556 family protein | |||
| 11425 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcosR7ORF11425P |
| 11430 | DNA-binding transcriptional regulator Fis | |||
| 18880 | phosphohydrolase | |||
| 18885 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcosR7DcmP |
| 18890 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcosR7DcmP |
| 18895 | drug/metabolite exporter YedA | |||
| 22420 | DUF3927 family protein | |||
| 22435 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcosR7ORF22435P |
| 22440 | TrmB family transcriptional regulator | |||
| 24650 | helix-turn-helix domain-containing protein | |||
| 24655 | M | M.KpnYN1ORFGP (89% identity) | M.EcosR7ORF24655P | |
| 24660 | 71 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18670 | shufflon system plasmid conjugative transfer | |||
| 18675 | R | Ecost88ORF24685P (100% identity) | EcosR7ORF18680P | |
| 18680 | M | M.EcosS2ORF3675P (100% identity) | M.EcosR7ORF18680P | |
| 18685 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4915 | BrnT family toxin | |||
| 4920 | R | Ecou021MrrP (100% identity) | EcosR7MrrP | |
| 4925 | type I restriction-modification system subunit | |||
| 5255 | glycosyltransferase | |||
| 5260 | R | EcosS3McrBP (100% identity) | EcosR7McrBP | |
| 5265 | R | EcosS9McrCP (100% identity) | EcosR7McrCP | |
| 5270 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pR7-S2K78-1 | ||||
| 25605 | 76 aa hypothetical protein | |||
| 25610 | M | M.Sso524ORF460P (100% identity) | GATC | M.EcosR7ORF25610P |
| 25615 | 269 aa hypothetical protein | |||