|
Putative Neisseria gonorrhoeae NJ1913940 RM systems
Ref: Zhao,Y. et al. unpublished
REBASE ref # 37289
Complete sequence: 2,213,791 bp
GenBank #: CP130895
REBASE acronym: Ngo40
Org_num: 69839
All begin Q6388_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2060 | ADP-glyceromanno-heptose 6-epimerase | |||
2065 | M | M.NgoJH7ORFLP (100% identity) | M.Ngo40ORF2065P | |
2070 | DNA damage-inducible protein D | |||
2075 | S | S1.NgoWSII (99% identity) | GCANNNNNNNNTGC | S1.Ngo40ORF2065P |
2080 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo40ORF2065P |
2085 | R | NgoWNIIP (100% identity) | Ngo40ORF2065P | |
2090 | ATP-dependent Clp protease ATP-binding subunit | |||
3575 | replication-associated recombination protein A | |||
3580 | R | NgoSH240ORFBP (99% identity) | GAGNNNNNTAC | Ngo40ORF3605P |
3585 | hydroxyacid dehydrogenase | |||
3590 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo40ORF3605P |
3595 | 186 aa hypothetical protein | |||
3600 | 279 aa hypothetical protein | |||
3605 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo40ORF3605P |
3610 | ABC transporter | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
30 | leucine--tRNA ligase | |||
35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo40ORF35P |
40 | site-specific DNA-methyltransferase | |||
35 | DpnI domain-containing protein | |||
??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo40ORFAP |
45 | 184 aa hypothetical protein | |||
1525 | phenylalanine--tRNA ligase subunit alpha | |||
1530 | V | V.NgoWSORF391P (100% identity) | V.Ngo40ORF1535P | |
??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo40ORF1535P |
1545 | R | NgoWSORF391P (100% identity) | CCGG | Ngo40ORF1535P |
1550 | phenylalanine--tRNA ligase subunit beta | |||
1825 | IS1595 family transposase | |||
1830 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo40ORF1830P |
1835 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo40ORF1830P |
1840 | protein Gly1ORF1 | |||
1865 | Z1 domain-containing protein | |||
1870 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo40ORF1875P |
1875 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo40ORF1875P |
1880 | DNA repair protein RadA | |||
3465 | 3-isopropylmalate dehydrogenase | |||
3470 | R | NgoSH240ORFIP (100% identity) | GGNNCC | Ngo40ORF3475P |
3475 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo40ORF3475P |
3480 | 3-isopropylmalate dehydratase small subunit | |||
6075 | replication initiation factor domain-containing | |||
6080 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo40ORF6095P | |
??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo40ORF6095P |
??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo40ORF6095P |
6105 | type IV pilin protein | |||
6290 | excinuclease ABC subunit UvrA | |||
6295 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo40ORF6300P |
6300 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo40ORF6300P |
6305 | 62 aa hypothetical protein | |||
9540 | FUSC family protein | |||
9545 | R | NgoSH240ORFKP (100% identity) | GGCC | Ngo40ORF9550P |
9550 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo40ORF9550P |
9555 | ribosome recycling factor | |||
10090 | 93 aa hypothetical protein | |||
10095 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo40ORF10100P |
10100 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.Ngo40ORF10100P |
10105 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo40ORF10100P |
10110 | Tex family protein | |||
10655 | GTPase ObgE | |||
10660 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo40ORF10660P |
10665 | R | NgoSH240ORFCP (91% identity) | RGCGCY | Ngo40ORF10660P |
10670 | cysteine--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2815 | peptidylprolyl isomerase | |||
2820 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo40ORF2820P | |
2825 | R | Ngos1291ORF8455P (100% identity) | Ngo40ORF2820P | |
2830 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
3285 | alpha-hydroxy acid oxidase | |||
3290 | R | NgoWPORF742P (99% identity) | GCAGA | Ngo40ORF3295P |
3295 | M | M.Ngo56ORF11615P (100% identity) | GCAGA | M.Ngo40ORF3295P |
3300 | tRNA pseudouridine(55) synthase TruB |