Pantoea species At-9b |
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Putative Pantoea species At-9b RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 12411
| Sequence length: | GenBank #: | |
| Chromosome: | 4,368,708 bp | CP002433 (NC_014837) |
| plasmid pPAT9B01: | 793,953 bp | CP002434 (NC_014838) |
| plasmid pPAT9B05: | 116,877 bp | CP002438 (NC_014842) |
REBASE acronym: Psp9
Org_num: 6618
All begin Pat9b_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2163 | 202 aa hypothetical protein | |||
| 2164 | M | M.Pan2665ORFAP (19% identity) | GATC | M.Psp9ORF2164P |
| 2165 | C-5 cytosine-specific DNA methylase | |||
| 2164 | phage N-6-adenine-methyltransferase | |||
| 2165 | M | M.Pan2665ORFAP (42% identity) | M.Psp9ORF2165P | |
| 2166 | excisionase | |||
| 2268 | bacteriophage replication gene A protein | |||
| 2269 | S | S.YenNW67ORF20200P (94% identity) | S.Psp9ORF2270P | |
| 2270 | RM | YenNW67ORF20200P (96% identity) | Psp9ORF2270P | |
| 2271 | phage portal protein, PBSX family | |||
| 2412 | 90 aa conserved hypothetical protein | |||
| 2413 | V | V.PspVM4DcmP (98% identity) | V.Psp9DcmP | |
| 2414 | M | M.PspVM4DcmP (95% identity) | CCWGG | M.Psp9DcmP |
| 2415 | methyl-accepting chemotaxis sensory transducer | |||
| 3312 | transcriptional regulator, XRE family | |||
| 3313 | M | M.PbaCE70ORF2880P (92% identity) | CGTACG | M.Psp9ORF3313P |
| 3314 | R | PbaCE70ORF2880P (97% identity) | CGTACG | Psp9ORF3313P |
| 3315 | transposase IS3 | |||
| 3685 | ribulose-phosphate 3-epimerase | |||
| 3686 | M | M.PspVM4DamP (99% identity) | GATC | M.Psp9DamP |
| 3687 | Sporulation domain protein | |||
| plasmid pPAT9B01 | ||||
| 5371 | 49 aa hypothetical protein | |||
| 5372 | M | M.Psp1ORF1760P (88% identity) | GATC | M.Psp9ORF5372P |
| 5373 | 43 aa hypothetical protein | |||
| plasmid pPAT9B05 | ||||
| 4047 | cytoplasmic protein | |||
| 4048 | M | M.PspJZ29ORF23090P (92% identity) | M.Psp9ORF4048P | |
| 4049 | 79 aa conserved hypothetical protein | |||