Pseudodesulfovibrio aespoeensis Aspo-2 |
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Putative Pseudodesulfovibrio aespoeensis Aspo-2 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 17863
Complete sequence: 3,629,109 bp
GenBank #: CP002431 (NC_014844)
REBASE acronym: PaeAs2
Org_num: 6616
All begin Daes_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 401 | type IIA topoisomerase, A subunit | |||
| 402 | RM | DpiV30ORF12622P (75% identity) | PaeAs2ORF402P | |
| 403 | 329 aa hypothetical protein | |||
| 429 | 71 aa hypothetical protein | |||
| 430 | M | M.PspSYKORF2450P (67% identity) | M.PaeAs2ORF430P | |
| 431 | 82 aa hypothetical protein | |||
| 1612 | DNA binding domain protein, excisionase family | |||
| 1613 | M | M.MspC1S70ORF4030P (98% identity) | GGATC | M.PaeAs2ORF1613P |
| 1614 | 120 aa hypothetical protein | |||
| 1654 | AAA-4 family protein | |||
| 1655 | M | M.Bwa9140ORF3629P (50% identity) | M.PaeAs2ORF1655P | |
| 1656 | 505 aa hypothetical protein | |||
| 1877 | transposase for insertion sequence element | |||
| 1878 | M | M.Adi293ORF1762P (76% identity) | M.PaeAs2ORF1878P | |
| 1879 | RM | Adi293ORF1762P (80% identity) | PaeAs2ORF1878P | |
| 1880 | relaxase/mobilisation nuclease domain-containing protein | |||
| 2380 | transposase IS3/IS911 family protein | |||
| 2381 | M | M.RstO365ORF33400P (40% identity) | M.PaeAs2ORF2381P | |
| 2382 | phage/conjugal plasmid C-4 type zinc finger | |||
| 2532 | 87 aa hypothetical protein | |||
| 2533 | M | M.Rsp34AORF19580P (45% identity) | M.PaeAs2ORF2533P | |
| 2534 | protein of unknown function DUF1703 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1666 | 89 aa hypothetical protein | |||
| 1667 | M | M.Asp70dORF19470P (28% identity) | M.PaeAs2ORF1667P | |
| 1669 | R | Dca1012BORFGP (56% identity) | PaeAs2ORF1667P | |
| 1670 | Extracellular ligand-binding receptor | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2932 | extracellular solute-binding protein family 1 | |||
| 2933 | R | DspG11MrrP (62% identity) | PaeAs2MrrP | |
| 2934 | 220 aa hypothetical protein | |||