Escherichia coli DDG220 |
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Putative Escherichia coli DDG220 RM systems
Ref: Wittum,T. unpublished
REBASE ref # 33734
| Sequence length: | GenBank #: | |
| Chromosome: | 4,869,779 bp | CP130706 |
| plasmid pDDG220-1: | 124,693 bp | CP130707 |
| plasmid pDDG220-2: | 88,205 bp | CP130708 |
REBASE acronym: Eco220
Org_num: 69573
All begin Q5R37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5070 | DDE-type integrase/transposase/recombinase | |||
| 5075 | S | S.EcoZ147ORF19115P (100% identity) | S.Eco220ORF5080P | |
| ??? | M | M.EcoZ147ORF19115P (100% identity) | M.Eco220ORF5080P | |
| 5090 | HsdR family type I site-specific | |||
| 5085 | IS5-like element ISKpn26 family transposase | |||
| 5090 | R | Sfl877IIP (100% identity) | AAAYNNNNNNCTC | Eco220ORF5100P |
| 5095 | S | S.Sfl877II (100% identity) | AAAYNNNNNNCTC | S.Eco220ORF5100P |
| 5100 | M | M.Sso8ORF17680P (100% identity) | AAAYNNNNNNCTC | M.Eco220ORF5100P |
| 5105 | GTPase family protein | |||
| 13935 | restriction system-associated AAA family ATPase | |||
| 13940 | S | S.Sen64034II (100% identity) | AGCNNNNNCTTC | S.Eco220ORF13945P |
| 13945 | M | M.Sen64034II (67% identity) | AGCNNNNNCTTC | M.Eco220ORF13945BP |
| 13950 | M | M.Sen64034II (29% identity) | AGCNNNNNCTTC | M.Eco220ORF13945AP |
| 13955 | L,D-transpeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3225 | 55 aa hypothetical protein | |||
| 3230 | R | Sso8ORF19860P (100% identity) | Eco220ORF3230P | |
| 3235 | HNH endonuclease | |||
| 15260 | LexA family transcriptional regulator | |||
| 15265 | M | M.EcoT167ORFEP (100% identity) | GATC | M.Eco220ORF15265P |
| 15270 | PerC family transcriptional regulator | |||
| 21045 | DNA-binding transcriptional regulator Fis | |||
| 21050 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco220ORF21050P |
| 21055 | 26 aa hypothetical protein | |||
| 21670 | ribulose-phosphate 3-epimerase | |||
| 21675 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco220DamP |
| 21680 | cell division protein DamX | |||
| plasmid pDDG220-1 | ||||
| 23555 | 103 aa hypothetical protein | |||
| 23560 | M | M.EcoP351ORF23470P (100% identity) | M.Eco220ORF23560P | |
| 23565 | 73 aa hypothetical protein | |||
| plasmid pDDG220-2 | ||||
| 24455 | 103 aa hypothetical protein | |||
| 24460 | M | M.Sso866ORF27155P (100% identity) | M.Eco220ORF24460P | |
| 24465 | 73 aa hypothetical protein | |||