Rhodococcus species RHA1 |
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Putative Rhodococcus species RHA1 RM systems
Ref: McLeod,M.P. et al. Proc. Natl. Acad. Sci. U.S.A. 103 (42), 15582-15587 (2006)
REBASE ref # 9746
| Sequence length: | GenBank #: | |
| Chromosome: | 7,804,765 bp | CP000431 (NC_008268) |
| plasmid pRHL3: | 332,361 bp | CP000434 (NC_008271) |
REBASE acronym: RspR
Org_num: 4469
All begin RHA1_ro
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1669 | probable transposase | |||
| 1670 | R | Rru4ORFGP (40% identity) | RspRORF1670P | |
| 1671 | possible transposase | |||
| plasmid pRHL3 | ||||
| 11150 | 129 aa hypothetical protein | |||
| 11151 | M | M.RspDK17ORFBP (93% identity) | M.RspRORF11151P | |
| 11152 | S | S.RspDK17ORFBP (56% identity) | S.RspRORF11151P | |
| 11153 | R | RspDK17ORFBP (96% identity) | RspRORF11151P | |
| 11154 | 488 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4147 | 89 aa hypothetical protein | |||
| 4148 | V | V.RspJVH1ORF5402P (100% identity) | V.RspRORF4149P | |
| 4149 | M | M.RopM213ORF1040P (97% identity) | M.RspRORF4149P | |
| 4150 | 365 aa conserved hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3941 | probable 5-methylcytosine-specific restriction | |||
| 3942 | R | probable 5-methylcytosine-specific restriction | RspRMcrBP | |
| 3943 | 131 aa conserved hypothetical protein | |||
| 5905 | chloride channel transporter | |||
| 5906 | R | Rwr13229MrrP (98% identity) | RspRMrrP | |
| 5907 | possible beta-lactamase precursor | |||