Riemerella columbina TH22 |
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Putative Riemerella columbina TH22 RM systems
Ref: Tan,M. unpublished
REBASE ref # 36541
Complete sequence: 2,044,714 bp
GenBank #: CP103950
REBASE acronym: RcoTH22
Org_num: 70835
All begin NYR17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4945 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 4950 | R | CspH2931ORF6060P (75% identity) | RcoTH22ORF4955P | |
| 4955 | M | M.Cca13ORF1520P (90% identity) | M.RcoTH22ORF4955P | |
| 4960 | S | S2.RcoTH22ORF4955P (58% identity) | S1.RcoTH22ORF4955P | |
| 4965 | tyrosine-type recombinase/integrase | |||
| 4970 | S | S1.RcoTH22ORF4955P (58% identity) | S2.RcoTH22ORF4955P | |
| 4975 | SAP domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3905 | helix-turn-helix domain-containing protein | |||
| 3910 | R | Tpu835McrB2P (24% identity) | RcoTH22McrBP | |
| 3915 | 61 aa hypothetical protein | |||
| 3920 | R | Gme92McrC2P (23% identity) | RcoTH22McrCP | |
| 3925 | phage integrase SAM-like domain-containing | |||