Escherichia coli MS20655 |
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Putative Escherichia coli MS20655 RM systems
Ref: Nhu,N.T.K. et al. unpublished
REBASE ref # 37246
| Sequence length: | GenBank #: | |
| Chromosome: | 4,834,475 bp | CP082080 |
| plasmid pMS20655A: | 149,988 bp | CP082081 |
REBASE acronym: Eco20655
Org_num: 69583
All begin K6137_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23010 | endoribonuclease SymE | |||
| 23015 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco20655ORF23020P |
| 23020 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.Eco20655ORF23020P |
| 23025 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco20655ORF23020P |
| 23030 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2725 | TrmB family transcriptional regulator | |||
| 2730 | M | M.EcosE1ORFAP (100% identity) | M.Eco20655ORF2730P | |
| 2735 | 63 aa hypothetical protein | |||
| 5335 | holin | |||
| 5340 | M | M.EcoVL02ORF18020P (100% identity) | M.Eco20655ORF5340P | |
| 5345 | 401 aa hypothetical protein | |||
| 13860 | LexA family transcriptional regulator | |||
| 13865 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.Eco20655ORF13865P |
| 13870 | PerC family transcriptional regulator | |||
| 17195 | DNA-binding transcriptional regulator Fis | |||
| 17200 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco20655ORF17200P |
| 17205 | DUF2556 family protein | |||
| 17795 | ribulose-phosphate 3-epimerase | |||
| 17800 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco20655DamP |
| 17805 | cell division protein DamX | |||
| 22770 | 59 aa hypothetical protein | |||
| 22775 | R | Ecoi127aORF4076P (100% identity) | Eco20655ORF22775P | |
| 22780 | HNH endonuclease | |||
| plasmid pMS20655A | ||||
| 23605 | TrmB family transcriptional regulator | |||
| 23610 | M | M.SboBSORF1444P (99% identity) | A | M.Eco20655ORF23610P |
| 23630 | DUF1737 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13665 | DinI-like family protein | |||
| 13670 | R | EspFAAGmrSDP (100% identity) | Eco20655GmrSDP | |
| 13675 | recombinase family protein | |||
| 23025 | type I restriction-modification system | |||
| 23030 | R | EcosS1MrrP (100% identity) | Eco20655MrrP | |
| 23035 | GTPase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6545 | recombination protein NinB | |||
| 6550 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco20655ORF6550P |
| 6555 | NinE family protein | |||