Escherichia coli MS20659 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli MS20659 RM systems
Ref: Nhu,N.T.K. et al. unpublished
REBASE ref # 37246
Complete sequence: 5,115,175 bp
GenBank #: CP082073
REBASE acronym: Eco659
Org_num: 69586
All begin K6140_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23675 | NADPH-dependent aldehyde reductase Ahr | |||
| 23685 | R | EcosA33IP (100% identity) | GAGNNNNNNGTC | Eco659ORF23695P |
| 23690 | S | S.EcosA4I (100% identity) | GAGNNNNNNGTC | S.Eco659ORF23695P |
| 23695 | M | M.EcosA4I (100% identity) | GAGNNNNNNGTC | M.Eco659ORF23695P |
| 23700 | DUF4942 domain-containing protein | |||
| 23955 | endoribonuclease SymE | |||
| 23960 | R | EcosA4IIP (99% identity) | GATANNNNNNTCC | Eco659ORF23970P |
| 23965 | S | S.EcosA4II (99% identity) | GATANNNNNNTCC | S.Eco659ORF23970P |
| 23970 | M | M.EcosA4II (100% identity) | GATANNNNNNTCC | M.Eco659ORF23970P |
| 23975 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4590 | TraR/DksA family transcriptional regulator | |||
| 4595 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.Eco659ORF4595P |
| 4600 | replication endonuclease | |||
| 13365 | PerC family transcriptional regulator | |||
| 13370 | M | M.EcosalpORF20815P (100% identity) | GATC | M.Eco659ORF13370P |
| 13375 | DUF1382 family protein | |||
| 17975 | DNA-binding transcriptional regulator Fis | |||
| 17980 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco659ORF17980P |
| 17985 | DUF2556 family protein | |||
| 18575 | ribulose-phosphate 3-epimerase | |||
| 18580 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco659DamP |
| 18585 | cell division protein DamX | |||
| 23710 | McrC family protein | |||
| 23715 | R | EcosA4ORF22115P (100% identity) | Eco659ORF23715P | |
| 23720 | HNH endonuclease | |||
| 24205 | PerC family transcriptional regulator | |||
| 24210 | M | M.EcosA33ORF3820P (100% identity) | GATC | M.Eco659ORF24210P |
| 24215 | LexA family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23700 | DUF4942 domain-containing protein | |||
| 23705 | R | EcosA4McrBP (100% identity) | Eco659McrBP | |
| 23710 | R | EcosA4McrCP (100% identity) | Eco659McrCP | |
| 23715 | HNH endonuclease | |||
| 23970 | type I restriction-modification system subunit | |||
| 23975 | R | EcosA4MrrP (100% identity) | Eco659MrrP | |
| 23980 | BrnT family toxin | |||