Escherichia coli CE0011b |
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Putative Escherichia coli CE0011b RM systems
Ref: Burgess,S.A. et al. unpublished
REBASE ref # 37116
Complete sequence: 5,246,002 bp
GenBank #: CP119008
REBASE acronym: Eco11b
Org_num: 68948
All begin PY721_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5365 | SprT family zinc-dependent metalloprotease | |||
| 5370 | R | EcoeV01ORF9070P (100% identity) | GATGNNNNNNTAC | Eco11bORF5390P |
| 5375 | cold shock domain-containing protein | |||
| 5380 | YecA family protein | |||
| 5385 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S1.Eco11bORF5390P |
| 5390 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Eco11bORF5390P |
| 5395 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3580 | IS66-like element ISEc22 family transposase | |||
| 3585 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco11bORF3585P | |
| 3590 | DUF977 family protein | |||
| 5650 | drug/metabolite exporter YedA | |||
| 5655 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco11bDcmP |
| 5660 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco11bDcmP |
| 5665 | phosphohydrolase | |||
| 9725 | 401 aa hypothetical protein | |||
| 9730 | M | M.EcoVL02ORF18020P (99% identity) | M.Eco11bORF9730P | |
| 9735 | holin | |||
| 12810 | 126 aa hypothetical protein | |||
| 12815 | M | M.EcoM17ORF9780P (100% identity) | M.Eco11bORF12815P | |
| 12820 | helix-turn-helix domain-containing protein | |||
| 13500 | DNA-binding transcriptional regulator Fis | |||
| 13505 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco11bORF13505P |
| 13510 | DUF2556 family protein | |||
| 14140 | ribulose-phosphate 3-epimerase | |||
| 14145 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco11bDamP |
| 14150 | cell division protein DamX | |||
| 19805 | peptidase | |||
| 19810 | R | SdySWHE2ORF4090P (100% identity) | Eco11bORF19810P | |
| 19815 | N-acetylneuraminic acid mutarotase | |||
| 19845 | DEAD/DEAH box helicase | |||
| 19850 | RM | EcoT33ORF2295P (100% identity) | GAAANTC | Eco11bORF19850P |